Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00040431 |
| length | 861 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 5 |
| gene id | XLOC_020364 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 19283978 ~ 19285300 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008236 | serine-type peptidase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050208-699 | Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. |
| ensembl_id | ENSDART00000131487 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00042128 | lncRNA | upstream | 687720 | 18560343 ~ 18596258 (+) | False | XLOC_020351 |
| TCONS_00042127 | lncRNA | upstream | 714590 | 18560343 ~ 18569388 (+) | False | XLOC_020351 |
| TCONS_00042129 | lncRNA | upstream | 714590 | 18565571 ~ 18569388 (+) | True | XLOC_020351 |
| TCONS_00042126 | lncRNA | upstream | 979690 | 18254860 ~ 18304288 (+) | False | XLOC_020344 |
| TCONS_00041895 | lncRNA | downstream | 553975 | 19839275 ~ 19839592 (+) | True | XLOC_020382 |
| TCONS_00042130 | lncRNA | downstream | 726496 | 20011796 ~ 20050276 (+) | True | XLOC_020383 |
| TCONS_00042131 | lncRNA | downstream | 961172 | 20246472 ~ 20247476 (+) | True | XLOC_020390 |
| TCONS_00042132 | lncRNA | downstream | 962609 | 20247909 ~ 20259347 (+) | True | XLOC_020391 |
| TCONS_00042133 | lncRNA | downstream | 975931 | 20261231 ~ 20265527 (+) | True | XLOC_020392 |
| TCONS_00040428 | mRNA | upstream | 4725 | 19277361 ~ 19279253 (+) | False | XLOC_020363 |
| TCONS_00040430 | mRNA | upstream | 5248 | 19277428 ~ 19278730 (+) | True | XLOC_020363 |
| TCONS_00040429 | mRNA | upstream | 5382 | 19277428 ~ 19278596 (+) | False | XLOC_020363 |
| TCONS_00040427 | mRNA | upstream | 15698 | 19266995 ~ 19268280 (+) | True | XLOC_020358 |
| TCONS_00040426 | mRNA | upstream | 15817 | 19266995 ~ 19268161 (+) | False | XLOC_020358 |
| TCONS_00040433 | mRNA | downstream | 4670 | 19289970 ~ 19291135 (+) | False | XLOC_020365 |
| TCONS_00040434 | mRNA | downstream | 4670 | 19289970 ~ 19291261 (+) | False | XLOC_020365 |
| TCONS_00040435 | mRNA | downstream | 4899 | 19290199 ~ 19291179 (+) | True | XLOC_020365 |
| TCONS_00040436 | mRNA | downstream | 26111 | 19311411 ~ 19313599 (+) | False | XLOC_020366 |
| TCONS_00040437 | mRNA | downstream | 26111 | 19311411 ~ 19313738 (+) | True | XLOC_020366 |
| TCONS_00040420 | other | upstream | 45752 | 19237031 ~ 19238226 (+) | True | XLOC_020360 |
| TCONS_00040385 | other | upstream | 1003538 | 18247292 ~ 18280440 (+) | False | XLOC_020344 |
| TCONS_00040386 | other | upstream | 1003538 | 18253158 ~ 18280440 (+) | False | XLOC_020344 |
| TCONS_00040387 | other | upstream | 1029123 | 18254769 ~ 18254855 (+) | False | XLOC_020344 |
| TCONS_00040381 | other | upstream | 1108600 | 18166599 ~ 18175378 (+) | False | XLOC_020342 |
| TCONS_00040469 | other | downstream | 486398 | 19771698 ~ 19771812 (+) | True | XLOC_020380 |
| TCONS_00040470 | other | downstream | 507819 | 19793119 ~ 19793233 (+) | True | XLOC_020381 |
| TCONS_00040472 | other | downstream | 854225 | 20139525 ~ 20139592 (+) | True | XLOC_020385 |
| TCONS_00040475 | other | downstream | 866625 | 20151925 ~ 20151981 (+) | True | XLOC_020387 |
| TCONS_00040488 | other | downstream | 1808551 | 21093851 ~ 21093965 (+) | True | XLOC_020402 |
