Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00040433 |
| length | 720 |
| RNA type | mRNA |
| GC content | 0.43 |
| exon number | 5 |
| gene id | XLOC_020365 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 19289970 ~ 19291261 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006508 | proteolysis | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0016021 | integral component of membrane | cellular_component |
| GO:0004252 | serine-type endopeptidase activity | molecular_function |
| GO:0016787 | hydrolase activity | molecular_function |
| GO:0008233 | peptidase activity | molecular_function |
| GO:0008236 | serine-type peptidase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-050208-780 | Predicted to enable serine-type endopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in membrane. Predicted to be integral component of membrane. |
| ensembl_id | ENSDART00000137976 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00042128 | lncRNA | upstream | 693712 | 18560343 ~ 18596258 (+) | False | XLOC_020351 |
| TCONS_00042127 | lncRNA | upstream | 720582 | 18560343 ~ 18569388 (+) | False | XLOC_020351 |
| TCONS_00042129 | lncRNA | upstream | 720582 | 18565571 ~ 18569388 (+) | True | XLOC_020351 |
| TCONS_00042126 | lncRNA | upstream | 985682 | 18254860 ~ 18304288 (+) | False | XLOC_020344 |
| TCONS_00041895 | lncRNA | downstream | 548140 | 19839275 ~ 19839592 (+) | True | XLOC_020382 |
| TCONS_00042130 | lncRNA | downstream | 720661 | 20011796 ~ 20050276 (+) | True | XLOC_020383 |
| TCONS_00042131 | lncRNA | downstream | 955337 | 20246472 ~ 20247476 (+) | True | XLOC_020390 |
| TCONS_00042132 | lncRNA | downstream | 956774 | 20247909 ~ 20259347 (+) | True | XLOC_020391 |
| TCONS_00042133 | lncRNA | downstream | 970096 | 20261231 ~ 20265527 (+) | True | XLOC_020392 |
| TCONS_00040431 | mRNA | upstream | 4670 | 19283978 ~ 19285300 (+) | False | XLOC_020364 |
| TCONS_00040432 | mRNA | upstream | 5006 | 19283991 ~ 19284964 (+) | True | XLOC_020364 |
| TCONS_00040428 | mRNA | upstream | 10717 | 19277361 ~ 19279253 (+) | False | XLOC_020363 |
| TCONS_00040430 | mRNA | upstream | 11240 | 19277428 ~ 19278730 (+) | True | XLOC_020363 |
| TCONS_00040429 | mRNA | upstream | 11374 | 19277428 ~ 19278596 (+) | False | XLOC_020363 |
| TCONS_00040436 | mRNA | downstream | 20276 | 19311411 ~ 19313599 (+) | False | XLOC_020366 |
| TCONS_00040437 | mRNA | downstream | 20276 | 19311411 ~ 19313738 (+) | True | XLOC_020366 |
| TCONS_00040438 | mRNA | downstream | 74085 | 19365220 ~ 19367357 (+) | False | XLOC_020367 |
| TCONS_00040439 | mRNA | downstream | 74137 | 19365272 ~ 19367313 (+) | False | XLOC_020367 |
| TCONS_00040440 | mRNA | downstream | 74154 | 19365289 ~ 19367357 (+) | False | XLOC_020367 |
| TCONS_00040420 | other | upstream | 51744 | 19237031 ~ 19238226 (+) | True | XLOC_020360 |
| TCONS_00040385 | other | upstream | 1009530 | 18247292 ~ 18280440 (+) | False | XLOC_020344 |
| TCONS_00040386 | other | upstream | 1009530 | 18253158 ~ 18280440 (+) | False | XLOC_020344 |
| TCONS_00040387 | other | upstream | 1035115 | 18254769 ~ 18254855 (+) | False | XLOC_020344 |
| TCONS_00040381 | other | upstream | 1114592 | 18166599 ~ 18175378 (+) | False | XLOC_020342 |
| TCONS_00040469 | other | downstream | 480563 | 19771698 ~ 19771812 (+) | True | XLOC_020380 |
| TCONS_00040470 | other | downstream | 501984 | 19793119 ~ 19793233 (+) | True | XLOC_020381 |
| TCONS_00040472 | other | downstream | 848390 | 20139525 ~ 20139592 (+) | True | XLOC_020385 |
| TCONS_00040475 | other | downstream | 860790 | 20151925 ~ 20151981 (+) | True | XLOC_020387 |
| TCONS_00040488 | other | downstream | 1802716 | 21093851 ~ 21093965 (+) | True | XLOC_020402 |
