Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00040465 |
| length | 1504 |
| RNA type | mRNA |
| GC content | 0.42 |
| exon number | 7 |
| gene id | XLOC_020378 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 19552987 ~ 19562455 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005576 | extracellular region | cellular_component |
| GO:0016491 | oxidoreductase activity | molecular_function |
| GO:0016229 | steroid dehydrogenase activity | molecular_function |
| id | description |
|---|---|
| ZDB-GENE-040426-1002 | Predicted to enable steroid dehydrogenase activity. Predicted to be located in extracellular region. Is expressed in intestinal bulb. Orthologous to human HSD11B1L (hydroxysteroid 11-beta dehydrogenase 1 like). |
| ensembl_id | ENSDART00000105315 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00042128 | lncRNA | upstream | 956729 | 18560343 ~ 18596258 (+) | False | XLOC_020351 |
| TCONS_00042127 | lncRNA | upstream | 983599 | 18560343 ~ 18569388 (+) | False | XLOC_020351 |
| TCONS_00042129 | lncRNA | upstream | 983599 | 18565571 ~ 18569388 (+) | True | XLOC_020351 |
| TCONS_00042126 | lncRNA | upstream | 1248699 | 18254860 ~ 18304288 (+) | False | XLOC_020344 |
| TCONS_00041895 | lncRNA | downstream | 276820 | 19839275 ~ 19839592 (+) | True | XLOC_020382 |
| TCONS_00042130 | lncRNA | downstream | 449341 | 20011796 ~ 20050276 (+) | True | XLOC_020383 |
| TCONS_00042131 | lncRNA | downstream | 684017 | 20246472 ~ 20247476 (+) | True | XLOC_020390 |
| TCONS_00042132 | lncRNA | downstream | 685454 | 20247909 ~ 20259347 (+) | True | XLOC_020391 |
| TCONS_00042133 | lncRNA | downstream | 698776 | 20261231 ~ 20265527 (+) | True | XLOC_020392 |
| TCONS_00040464 | mRNA | upstream | 9182 | 19538626 ~ 19543805 (+) | True | XLOC_020377 |
| TCONS_00040462 | mRNA | upstream | 22306 | 19522982 ~ 19530681 (+) | False | XLOC_020376 |
| TCONS_00040461 | mRNA | upstream | 22306 | 19522982 ~ 19530681 (+) | False | XLOC_020376 |
| TCONS_00040463 | mRNA | upstream | 22968 | 19528851 ~ 19530019 (+) | True | XLOC_020376 |
| TCONS_00040460 | mRNA | upstream | 34198 | 19518195 ~ 19518789 (+) | True | XLOC_020375 |
| TCONS_00040467 | mRNA | downstream | 77854 | 19640309 ~ 19646420 (+) | False | XLOC_020379 |
| TCONS_00040468 | mRNA | downstream | 77854 | 19640309 ~ 19646421 (+) | True | XLOC_020379 |
| TCONS_00040471 | mRNA | downstream | 572988 | 20135443 ~ 20143425 (+) | False | XLOC_020384 |
| TCONS_00040473 | mRNA | downstream | 579073 | 20141528 ~ 20142205 (+) | True | XLOC_020384 |
| TCONS_00040474 | mRNA | downstream | 582581 | 20145036 ~ 20155026 (+) | True | XLOC_020386 |
| TCONS_00040420 | other | upstream | 314761 | 19237031 ~ 19238226 (+) | True | XLOC_020360 |
| TCONS_00040385 | other | upstream | 1272547 | 18247292 ~ 18280440 (+) | False | XLOC_020344 |
| TCONS_00040386 | other | upstream | 1272547 | 18253158 ~ 18280440 (+) | False | XLOC_020344 |
| TCONS_00040387 | other | upstream | 1298132 | 18254769 ~ 18254855 (+) | False | XLOC_020344 |
| TCONS_00040381 | other | upstream | 1377609 | 18166599 ~ 18175378 (+) | False | XLOC_020342 |
| TCONS_00040469 | other | downstream | 209243 | 19771698 ~ 19771812 (+) | True | XLOC_020380 |
| TCONS_00040470 | other | downstream | 230664 | 19793119 ~ 19793233 (+) | True | XLOC_020381 |
| TCONS_00040472 | other | downstream | 577070 | 20139525 ~ 20139592 (+) | True | XLOC_020385 |
| TCONS_00040475 | other | downstream | 589470 | 20151925 ~ 20151981 (+) | True | XLOC_020387 |
| TCONS_00040488 | other | downstream | 1531396 | 21093851 ~ 21093965 (+) | True | XLOC_020402 |
