Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021624778.2 |
| length | 734 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 6 |
| gene id | LOC110538147 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 69166428 ~ 69168888 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0005840 | ribosome | cellular_component |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02885 | RP-L19e, RPL19; large subunit ribosomal protein L19e |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1256126 | lncRNA | upstream | 5710 | 69160451 ~ 69160718 (+) | True | G1104709 |
| TU1256124 | lncRNA | upstream | 6927 | 69159279 ~ 69159501 (+) | True | G1104707 |
| TU1256072 | lncRNA | upstream | 45007 | 69119873 ~ 69121421 (+) | True | G1104661 |
| TU1256077 | lncRNA | upstream | 62251 | 69103884 ~ 69104177 (+) | True | G1104666 |
| TU1256018 | lncRNA | upstream | 78091 | 69084363 ~ 69088337 (+) | True | G1104609 |
| TU1256122 | lncRNA | downstream | 4894 | 69173782 ~ 69175963 (+) | True | LOC110538148 |
| TU1256141 | lncRNA | downstream | 19682 | 69188570 ~ 69188771 (+) | True | G1104724 |
| TU1256143 | lncRNA | downstream | 21455 | 69190343 ~ 69191367 (+) | True | G1104726 |
| TU1256160 | lncRNA | downstream | 36257 | 69205145 ~ 69205398 (+) | True | G1104741 |
| TU1256158 | lncRNA | downstream | 41636 | 69210524 ~ 69212869 (+) | True | G1104739 |
| trnac-gca-6 | mRNA | upstream | 57285 | 69109072 ~ 69109143 (+) | True | trnac-gca-6 |
| trnac-gca-5 | mRNA | upstream | 65347 | 69101010 ~ 69101081 (+) | True | trnac-gca-5 |
| XM_021624765.2 | mRNA | upstream | 250038 | 68914297 ~ 68916390 (+) | True | LOC110538140 |
| XM_021624751.2 | mRNA | upstream | 371810 | 68788366 ~ 68794618 (+) | False | LOC110538134 |
| XR_002475702.2 | mRNA | downstream | 2631 | 69171519 ~ 69175969 (+) | False | LOC110538148 |
| XR_005035121.1 | mRNA | downstream | 4885 | 69173773 ~ 69175969 (+) | False | LOC110538148 |
| LOC110538150 | mRNA | downstream | 28778 | 69197666 ~ 69229200 (+) | True | LOC110538150 |
| XM_036938216.1 | mRNA | downstream | 146563 | 69315451 ~ 69321518 (+) | False | LOC110538155 |
| XM_036938217.1 | mRNA | downstream | 146563 | 69315451 ~ 69321518 (+) | False | LOC110538155 |
| TU1255496 | other | upstream | 634567 | 68528281 ~ 68531861 (+) | True | G1104162 |
| TU1255479 | other | upstream | 661133 | 68504041 ~ 68505295 (+) | False | G1104149 |
| TU1255480 | other | upstream | 661133 | 68504041 ~ 68505295 (+) | True | G1104149 |
| TU1254663 | other | upstream | 1157951 | 67987694 ~ 68008477 (+) | False | G1103416 |
| TU1254582 | other | upstream | 1356365 | 67805349 ~ 67810063 (+) | True | LOC110538103 |
| TU1256153 | other | downstream | 146844 | 69315732 ~ 69317648 (+) | True | LOC110538155 |
| TU1256295 | other | downstream | 654327 | 69823215 ~ 69855195 (+) | True | LOC110538173 |
| TU1256653 | other | downstream | 853820 | 70022708 ~ 70025363 (+) | False | G1105194 |
| TU1256654 | other | downstream | 853820 | 70022708 ~ 70048987 (+) | True | G1105194 |
| TU1256743 | other | downstream | 993801 | 70162689 ~ 70194672 (+) | True | G1105281 |
