Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00040504 |
| length | 657 |
| lncRNA type | sense_over |
| GC content | 0.58 |
| exon number | 5 |
| gene id | XLOC_020411 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007133.7 |
| NCBI id | CM002906.2 |
| chromosome length | 39133080 |
| location | 21618121 ~ 21667832 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0006355 | regulation of transcription, DNA-templated | biological_process |
| GO:0090090 | negative regulation of canonical Wnt signaling pathway | biological_process |
| GO:0005634 | nucleus | cellular_component |
| GO:0005667 | transcription regulator complex | cellular_component |
| GO:0070491 | repressing transcription factor binding | molecular_function |
| GO:0003714 | transcription corepressor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00040493 | lncRNA | upstream | 374077 | 21279721 ~ 21281352 (+) | True | XLOC_020405 |
| TCONS_00042137 | lncRNA | upstream | 514310 | 21134709 ~ 21141119 (+) | True | XLOC_020403 |
| TCONS_00042136 | lncRNA | upstream | 1081469 | 20571834 ~ 20573960 (+) | True | XLOC_020399 |
| TCONS_00041896 | lncRNA | upstream | 1221412 | 20433570 ~ 20434017 (+) | True | XLOC_020395 |
| TCONS_00042134 | lncRNA | upstream | 1322595 | 20312803 ~ 20332834 (+) | False | XLOC_020393 |
| TCONS_00042138 | lncRNA | downstream | 10881 | 21669165 ~ 21766839 (+) | True | XLOC_020412 |
| TCONS_00042139 | lncRNA | downstream | 128495 | 21786779 ~ 21787648 (+) | True | XLOC_020413 |
| TCONS_00042140 | lncRNA | downstream | 130812 | 21789096 ~ 21797741 (+) | True | XLOC_020414 |
| TCONS_00041897 | lncRNA | downstream | 164675 | 21822959 ~ 21823227 (+) | True | XLOC_020415 |
| TCONS_00042141 | lncRNA | downstream | 190002 | 21848286 ~ 21852131 (+) | True | XLOC_020416 |
| TCONS_00040502 | mRNA | upstream | 70759 | 21549419 ~ 21584670 (+) | True | XLOC_020410 |
| TCONS_00040499 | mRNA | upstream | 107572 | 21516689 ~ 21547857 (+) | False | XLOC_020409 |
| TCONS_00040500 | mRNA | upstream | 110189 | 21516731 ~ 21545240 (+) | False | XLOC_020409 |
| TCONS_00040501 | mRNA | upstream | 127779 | 21518528 ~ 21527650 (+) | True | XLOC_020409 |
| TCONS_00040497 | mRNA | upstream | 189621 | 21398508 ~ 21465808 (+) | False | XLOC_020408 |
| TCONS_00040506 | mRNA | downstream | 231538 | 21889822 ~ 21911948 (+) | False | XLOC_020417 |
| TCONS_00040507 | mRNA | downstream | 292554 | 21950838 ~ 21957192 (+) | True | XLOC_020418 |
| TCONS_00040508 | mRNA | downstream | 306864 | 21965148 ~ 21968364 (+) | True | XLOC_020419 |
| TCONS_00040509 | mRNA | downstream | 314540 | 21972824 ~ 21984064 (+) | False | XLOC_020420 |
| TCONS_00040510 | mRNA | downstream | 314588 | 21972872 ~ 21981787 (+) | True | XLOC_020420 |
| TCONS_00040488 | other | upstream | 561464 | 21093851 ~ 21093965 (+) | True | XLOC_020402 |
| TCONS_00040475 | other | upstream | 1503448 | 20151925 ~ 20151981 (+) | True | XLOC_020387 |
| TCONS_00040472 | other | upstream | 1515837 | 20139525 ~ 20139592 (+) | True | XLOC_020385 |
| TCONS_00040470 | other | upstream | 1862196 | 19793119 ~ 19793233 (+) | True | XLOC_020381 |
| TCONS_00040469 | other | upstream | 1883617 | 19771698 ~ 19771812 (+) | True | XLOC_020380 |
| TCONS_00040522 | other | downstream | 907890 | 22566174 ~ 22588719 (+) | True | XLOC_020427 |
| TCONS_00040524 | other | downstream | 1182274 | 22840558 ~ 22840675 (+) | True | XLOC_020429 |
| TCONS_00040525 | other | downstream | 1297448 | 22955732 ~ 22955849 (+) | True | XLOC_020430 |
| TCONS_00040526 | other | downstream | 1437404 | 23095688 ~ 23095804 (+) | True | XLOC_020431 |
| TCONS_00040529 | other | downstream | 1834042 | 23492326 ~ 23493332 (+) | True | XLOC_020436 |
