RNA id: XM_036939627.1


Basic Information

Item Value
RNA id XM_036939627.1
length 1169
RNA type mRNA
GC content 0.55
exon number 8
gene id nat15
representative True

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 100473554 ~ 100499497 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

TGTGACATACACAGGAAGAAGCCAACTCGGCTAGTTGTCAAATTAGCAAACGCTGACTAGCCAGCTAATGTATTGGTGGGAGACCAGTGTCAGTGGTTTTCTGAATAGAGAGCAAATTTGGGGTTTATCATGGTGTTTCCACTGTAGAAAACACTTTAAACGACACCCAAGGGATTTCACCCCACACTTTCCTCTTGTTCGAGCGCATAAACAAGGTGTGAATGACCGACGTGGTGTCCCCCACTGCGCTCAGCGAAGTCCAGCTCCGCCTCCTCTGCCACGATGACATAGGCAGCGTCAAGCTGCTGTGCGGTGATTGGTTCCCCATCGAGTACCCAGACTCATGGTATAATGACATCACATCCAACAAGAAGTTCTTCTCCCTCGCCGCCATCTTCAAGGGAGGCATCGTGGGAATGATCGTAGCTGAGATCAAGGGCCGGACCAAAGTACACAGAGAGgatGGAGACATCCTAGCCTCTAGATTTCCCGTGGACACCCAGGTGGCTTACATCCTGAGTCTGGGGGTGGTGAAGGAGTTCAGGAAACATGGAATAGGCTCCTTGCTGCTGGACAGTCTGAAGGAACACATCTCCACCACGGCCCAGGACCACTGCAAGGCCATCTACCTCCACGTGCTGACAACCAACACCACGGCTATACACTTCTACCACAACAGAGACTTCACGCAGCATCACTACCTACCTTACTACTACTCCATACGAGGGGTGCTGAAAGATGGGTTCACCTACGTACTGTACATCAACGGAGGGCATCCgccctggacgctcttTGACTACATCCAACACATTGGCTCGGCCCTGGCCAGCCTCAGTCCCTGCTCGATCCCCCAGAGACTCTACAGACAGGCCCAGTCTCTGCTCCGTAGCCTGATACCCTGGTCCGGCATCGCATCCAAGACTGGTATCCAGTACAGCAGGACCATGTGACAGTACAGAACCCTCTGACCTCATCTGACCCTCCACCACTCGGAACCCTGGAAAGACTGAGGGCTGAGACCCCCCAAACACCAACCAAGCCACCCAGCCACTAAGCCCAGACCCTACAAACCAAGCCACTCAGCCCACCAAACCAagccacccagcccagcccaccaAACCAAGCCGCCCAGCCCAGCCCACCAAACCAAGCCGCCCAGCCCAGCCCAC

Function

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0008080 N-acetyltransferase activity molecular_function

KEGG:

id description
K21121 NAA60; N-alpha-acetyltransferase 60

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1291419 lncRNA downstream 1430 100470638 ~ 100472124 (-) True G1134115
TU1291424 lncRNA downstream 3006 100468669 ~ 100470548 (-) True G1134116
TU1291422 lncRNA downstream 5082 100467492 ~ 100468472 (-) False G1134116
TU1291495 lncRNA downstream 31732 100441395 ~ 100441822 (-) True G1134165
TU1291426 lncRNA downstream 50488 100420957 ~ 100423066 (-) False G1134117
TU1291511 lncRNA upstream 668 100500165 ~ 100500664 (-) True G1134180
TU1291512 lncRNA upstream 1224 100500721 ~ 100501020 (-) True G1134181
TU1291513 lncRNA upstream 2702 100502199 ~ 100502548 (-) True G1134182
TU1291523 lncRNA upstream 22106 100521603 ~ 100523169 (-) True G1134191
TU1291526 lncRNA upstream 29552 100529049 ~ 100529789 (-) True G1134194
XM_036939635.1 mRNA downstream 10828 100434251 ~ 100462726 (-) True carhsp1
XM_036939630.1 mRNA downstream 177963 100258230 ~ 100295591 (-) False LOC118937853
XM_036939620.1 mRNA downstream 487649 99969674 ~ 99985905 (-) True LOC110539073
XR_005035275.1 mRNA downstream 505091 99966423 ~ 99968463 (-) True LOC118937866
XM_036939601.1 mRNA downstream 508307 99946736 ~ 99965247 (-) True LOC110539071
XM_036939622.1 mRNA upstream 30687 100530184 ~ 100543453 (-) False eci1
XM_036939623.1 mRNA upstream 49690 100549187 ~ 100558850 (-) True c12h16orf72
XR_005035286.1 mRNA upstream 124673 100624170 ~ 100625726 (-) False LOC118937871
XM_036939636.1 mRNA upstream 128943 100628440 ~ 100651699 (-) False LOC118937858
XM_036939647.1 mRNA upstream 317047 100816544 ~ 100821913 (-) False LOC118937873
TU1291428 other downstream 50488 100420957 ~ 100423066 (-) True G1134117
TU1291344 other downstream 177988 100258654 ~ 100295566 (-) True LOC118937853
TU1291316 other downstream 262406 100210457 ~ 100211148 (-) True G1134054
TU1289875 other downstream 548428 99924060 ~ 99925126 (-) False G1133028
TU1291514 other upstream 4108 100503605 ~ 100504088 (-) True G1134183
TU1291403 other upstream 35353 100534850 ~ 100543369 (-) False eci1
TU1291411 other upstream 35670 100535167 ~ 100543369 (-) True eci1
TU1291540 other upstream 128946 100628443 ~ 100634457 (-) False LOC118937858
TU1291773 other upstream 317775 100817272 ~ 100817920 (-) True LOC118937873

Expression Profile