Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1178735 |
| length | 385 |
| lncRNA type | antisense_over |
| GC content | 0.56 |
| exon number | 3 |
| gene id | G1034561 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 8099689 ~ 8100359 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1178767 | lncRNA | downstream | 25749 | 8073670 ~ 8073940 (-) | True | G1034592 |
| TU1178740 | lncRNA | downstream | 60099 | 8039255 ~ 8039590 (-) | True | G1034566 |
| TU1178738 | lncRNA | downstream | 65458 | 8033937 ~ 8034231 (-) | True | G1034564 |
| TU1178737 | lncRNA | downstream | 66199 | 8033184 ~ 8033490 (-) | True | G1034563 |
| TU1178728 | lncRNA | downstream | 81083 | 8012865 ~ 8018606 (-) | True | G1034557 |
| TU1178798 | lncRNA | upstream | 22922 | 8123281 ~ 8124156 (-) | True | G1034614 |
| TU1178794 | lncRNA | upstream | 125559 | 8225918 ~ 8226507 (-) | True | G1034610 |
| TU1178830 | lncRNA | upstream | 130917 | 8231276 ~ 8232542 (-) | True | G1034644 |
| TU1178836 | lncRNA | upstream | 143304 | 8243663 ~ 8244337 (-) | True | G1034649 |
| TU1178845 | lncRNA | upstream | 155433 | 8255792 ~ 8257078 (-) | True | G1034655 |
| XM_021622585.2 | mRNA | downstream | 118486 | 7978843 ~ 7981203 (-) | True | LOC110536909 |
| XM_021622583.2 | mRNA | downstream | 198774 | 7899626 ~ 7900915 (-) | False | LOC101268972 |
| XM_021622580.2 | mRNA | downstream | 248081 | 7837607 ~ 7851608 (-) | True | stbd1 |
| XM_036936803.1 | mRNA | downstream | 278171 | 7647555 ~ 7821518 (-) | False | LOC110523118 |
| XM_036936802.1 | mRNA | downstream | 278177 | 7647555 ~ 7821512 (-) | False | LOC110523118 |
| XM_036936812.1 | mRNA | upstream | 27489 | 8127848 ~ 8199440 (-) | False | LOC110536914 |
| XM_036936810.1 | mRNA | upstream | 27489 | 8127848 ~ 8205392 (-) | False | LOC110536914 |
| XM_036936811.1 | mRNA | upstream | 27489 | 8127848 ~ 8205393 (-) | True | LOC110536914 |
| NM_001124579.2 | mRNA | upstream | 145651 | 8246010 ~ 8252914 (-) | True | LOC100136343 |
| XR_005034853.1 | mRNA | upstream | 178182 | 8278541 ~ 8288538 (-) | True | LOC118937621 |
| TU1178568 | other | downstream | 265111 | 7827880 ~ 7834578 (-) | True | G1034443 |
| TU1178484 | other | downstream | 317651 | 7721252 ~ 7782038 (-) | True | LOC110523118 |
| TU1176586 | other | downstream | 1899355 | 6197017 ~ 6200334 (-) | True | G1032941 |
| TU1175815 | other | downstream | 2316325 | 5782940 ~ 5783364 (-) | True | G1032314 |
| TU1175654 | other | downstream | 2555181 | 5538381 ~ 5544508 (-) | True | LOC110536877 |
| TU1178862 | other | upstream | 178980 | 8279339 ~ 8279866 (-) | True | G1034667 |
| TU1179454 | other | upstream | 735897 | 8836256 ~ 8838834 (-) | True | G1035160 |
| TU1179584 | other | upstream | 918148 | 9018507 ~ 9042680 (-) | False | hcn1 |
| TU1179583 | other | upstream | 937228 | 9037587 ~ 9042680 (-) | False | hcn1 |
| TU1179591 | other | upstream | 937228 | 9037587 ~ 9042680 (-) | False | hcn1 |
