Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1178836 |
| length | 388 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 2 |
| gene id | G1034649 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 8243663 ~ 8244337 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1178830 | lncRNA | downstream | 11121 | 8231276 ~ 8232542 (-) | True | G1034644 |
| TU1178794 | lncRNA | downstream | 17156 | 8225918 ~ 8226507 (-) | True | G1034610 |
| TU1178798 | lncRNA | downstream | 119507 | 8123281 ~ 8124156 (-) | True | G1034614 |
| TU1178735 | lncRNA | downstream | 143304 | 8099689 ~ 8100359 (-) | True | G1034561 |
| TU1178767 | lncRNA | downstream | 169723 | 8073670 ~ 8073940 (-) | True | G1034592 |
| TU1178845 | lncRNA | upstream | 11455 | 8255792 ~ 8257078 (-) | True | G1034655 |
| TU1178843 | lncRNA | upstream | 11889 | 8256226 ~ 8256848 (-) | True | G1034654 |
| TU1178685 | lncRNA | upstream | 62690 | 8307027 ~ 8307650 (-) | True | G1034522 |
| TU1178893 | lncRNA | upstream | 120709 | 8365046 ~ 8369169 (-) | True | G1034696 |
| TU1178919 | lncRNA | upstream | 172998 | 8417335 ~ 8418652 (-) | True | G1034718 |
| XM_036936811.1 | mRNA | downstream | 38270 | 8127848 ~ 8205393 (-) | True | LOC110536914 |
| XM_036936810.1 | mRNA | downstream | 38271 | 8127848 ~ 8205392 (-) | False | LOC110536914 |
| XM_036936812.1 | mRNA | downstream | 44223 | 8127848 ~ 8199440 (-) | False | LOC110536914 |
| XM_021622585.2 | mRNA | downstream | 262460 | 7978843 ~ 7981203 (-) | True | LOC110536909 |
| XM_021622583.2 | mRNA | downstream | 342748 | 7899626 ~ 7900915 (-) | False | LOC101268972 |
| NM_001124579.2 | mRNA | upstream | 1673 | 8246010 ~ 8252914 (-) | True | LOC100136343 |
| XR_005034853.1 | mRNA | upstream | 34204 | 8278541 ~ 8288538 (-) | True | LOC118937621 |
| XM_036936816.1 | mRNA | upstream | 47214 | 8291551 ~ 8460670 (-) | False | ptpn13 |
| XM_036936814.1 | mRNA | upstream | 47214 | 8291551 ~ 8460671 (-) | False | ptpn13 |
| XM_036936815.1 | mRNA | upstream | 47214 | 8291551 ~ 8460671 (-) | True | ptpn13 |
| TU1178568 | other | downstream | 409085 | 7827880 ~ 7834578 (-) | True | G1034443 |
| TU1178484 | other | downstream | 461625 | 7721252 ~ 7782038 (-) | True | LOC110523118 |
| TU1176586 | other | downstream | 2043329 | 6197017 ~ 6200334 (-) | True | G1032941 |
| TU1175815 | other | downstream | 2460299 | 5782940 ~ 5783364 (-) | True | G1032314 |
| TU1175654 | other | downstream | 2699155 | 5538381 ~ 5544508 (-) | True | LOC110536877 |
| TU1178862 | other | upstream | 35002 | 8279339 ~ 8279866 (-) | True | G1034667 |
| TU1179454 | other | upstream | 591919 | 8836256 ~ 8838834 (-) | True | G1035160 |
| TU1179584 | other | upstream | 774170 | 9018507 ~ 9042680 (-) | False | hcn1 |
| TU1179583 | other | upstream | 793250 | 9037587 ~ 9042680 (-) | False | hcn1 |
| TU1179591 | other | upstream | 793250 | 9037587 ~ 9042680 (-) | False | hcn1 |
