Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1183558 |
| length | 220 |
| lncRNA type | inter_gene |
| GC content | 0.61 |
| exon number | 2 |
| gene id | G1038564 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 12202314 ~ 12231459 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1183551 | lncRNA | downstream | 23161 | 12178804 ~ 12179153 (-) | True | G1038557 |
| TU1183550 | lncRNA | downstream | 25427 | 12176400 ~ 12176887 (-) | True | G1038556 |
| TU1183518 | lncRNA | downstream | 59484 | 12140405 ~ 12142830 (-) | True | G1038525 |
| TU1183538 | lncRNA | downstream | 69374 | 12132620 ~ 12132940 (-) | True | G1038545 |
| TU1183537 | lncRNA | downstream | 70344 | 12131770 ~ 12131970 (-) | True | G1038544 |
| TU1183666 | lncRNA | upstream | 146126 | 12377585 ~ 12395184 (-) | True | G1038657 |
| TU1183680 | lncRNA | upstream | 170571 | 12402030 ~ 12408761 (-) | False | G1038667 |
| TU1183679 | lncRNA | upstream | 171678 | 12403137 ~ 12408761 (-) | True | G1038667 |
| TU1183724 | lncRNA | upstream | 230981 | 12462440 ~ 12546806 (-) | True | G1038703 |
| TU1183737 | lncRNA | upstream | 241693 | 12473152 ~ 12477603 (-) | True | G1038714 |
| XM_036936936.1 | mRNA | downstream | 6861 | 12165715 ~ 12195453 (-) | True | LOC110536982 |
| XM_036936937.1 | mRNA | downstream | 9659 | 12165715 ~ 12192655 (-) | False | LOC110536982 |
| NM_001124386.1 | mRNA | downstream | 53113 | 12144886 ~ 12149201 (-) | True | ambp |
| XM_036936931.1 | mRNA | downstream | 167430 | 12019437 ~ 12034884 (-) | False | LOC110536978 |
| XM_036936932.1 | mRNA | downstream | 167430 | 12019437 ~ 12034884 (-) | False | LOC110536978 |
| XM_036936938.1 | mRNA | upstream | 16333 | 12247792 ~ 12282813 (-) | True | LOC110536783 |
| XM_036936940.1 | mRNA | upstream | 271600 | 12503059 ~ 12522639 (-) | True | LOC110536785 |
| XM_036937594.1 | mRNA | upstream | 315857 | 12547316 ~ 12549945 (-) | True | LOC118937673 |
| XM_036936941.1 | mRNA | upstream | 409468 | 12640927 ~ 12758875 (-) | False | LOC110536786 |
| XM_036936942.1 | mRNA | upstream | 411995 | 12643454 ~ 12709985 (-) | False | LOC110536786 |
| TU1183262 | other | downstream | 463537 | 11666987 ~ 11738777 (-) | True | G1038295 |
| TU1183218 | other | downstream | 586371 | 11606351 ~ 11615943 (-) | True | G1038258 |
| TU1182137 | other | downstream | 971482 | 11213951 ~ 11230832 (-) | False | LOC110536956 |
| TU1182138 | other | downstream | 971482 | 11213951 ~ 11230832 (-) | True | LOC110536956 |
| TU1181957 | other | downstream | 1095994 | 11105935 ~ 11106320 (-) | True | G1037217 |
| TU1183605 | other | upstream | 58065 | 12289524 ~ 12290472 (-) | False | G1038606 |
| TU1183606 | other | upstream | 58065 | 12289524 ~ 12290472 (-) | False | G1038606 |
| TU1183607 | other | upstream | 58065 | 12289524 ~ 12292538 (-) | True | G1038606 |
| TU1183992 | other | upstream | 489042 | 12720501 ~ 12721154 (-) | True | G1038943 |
| TU1184465 | other | upstream | 916199 | 13147658 ~ 13176443 (-) | True | G1039364 |
