RNA id: TU1190651


Basic Information

Item Value
RNA id TU1190651
length 350
lncRNA type intronic
GC content 0.57
exon number 1
gene id G1044760
representative True

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 18191638 ~ 18191987 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

gcctctctcgctctgtgtctctgcctctctcgctctgtgtctctgcctctctcgctctgtgtctctgcctctctcgctctgtgtctctgcctctctcgctctgtgtctctgcctctctcgctctgtgtctctgcctctctcgctctgtgtctctgcctctcgctctgtgtctctgcctctctcgctctgtgtgtctctgcctctctcgctctgtgtgtctctgcctctctctctctgtgtgtctctgcctctctctctctgtgtgtctctgcctctctctctctgtgtgtctctgcctctctctctctctctgtgtgtctctgcctctctctctctctctctgtgtgtct

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1190646 lncRNA downstream 5836 18185452 ~ 18185802 (-) True G1044756
TU1190647 lncRNA downstream 7276 18184087 ~ 18184362 (-) True G1044757
TU1190645 lncRNA downstream 7992 18183444 ~ 18183646 (-) True G1044755
TU1190644 lncRNA downstream 8592 18182807 ~ 18183046 (-) True G1044754
TU1190643 lncRNA downstream 9382 18181979 ~ 18182256 (-) True G1044753
TU1190653 lncRNA upstream 1731 18193718 ~ 18193953 (-) True G1044762
TU1190654 lncRNA upstream 2039 18194026 ~ 18194917 (-) True G1044763
TU1190655 lncRNA upstream 3010 18194997 ~ 18195431 (-) True G1044764
TU1190671 lncRNA upstream 18882 18210869 ~ 18211206 (-) True G1044780
TU1190699 lncRNA upstream 63215 18255202 ~ 18257887 (-) True G1044804
LOC110537117 mRNA downstream 90757 18100033 ~ 18100881 (-) True LOC110537117
XM_036937108.1 mRNA downstream 112126 18069650 ~ 18079512 (-) True LOC110537114
XM_021622897.2 mRNA downstream 112874 18069650 ~ 18078764 (-) False LOC110537114
XM_036937106.1 mRNA downstream 112874 18069650 ~ 18078764 (-) False LOC110537114
XM_036938892.1 mRNA downstream 227573 17961976 ~ 17964065 (-) True LOC118937764
XM_021622903.2 mRNA upstream 97983 18289970 ~ 18297738 (-) False LOC110537118
XM_021622904.2 mRNA upstream 144864 18336851 ~ 18387111 (-) False LOC110537119
XM_036937111.1 mRNA upstream 144864 18336851 ~ 18387113 (-) True LOC110537119
XM_021622906.2 mRNA upstream 247772 18439759 ~ 18458056 (-) False LOC110537121
XM_021622907.2 mRNA upstream 248018 18440005 ~ 18458056 (-) False LOC110537121
TU1190582 other downstream 91916 18097563 ~ 18099722 (-) False G1044692
TU1190580 other downstream 91916 18097652 ~ 18099722 (-) True G1044692
TU1190557 other downstream 133246 18056111 ~ 18058392 (-) True G1044671
TU1190533 other downstream 172880 18018104 ~ 18018758 (-) True G1044649
TU1190341 other downstream 494533 17696129 ~ 17697105 (-) True G1044482
TU1190652 other upstream 247 18192234 ~ 18193223 (-) True G1044761
TU1190787 other upstream 254694 18446681 ~ 18447251 (-) True LOC110537121
TU1191128 other upstream 621915 18813902 ~ 18815394 (-) True G1045201
TU1191233 other upstream 667875 18859862 ~ 18905106 (-) False LOC110537130
TU1191234 other upstream 667875 18859862 ~ 18868059 (-) True LOC110537130

Expression Profile