Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1198820 |
| length | 220 |
| lncRNA type | inter_gene |
| GC content | 0.46 |
| exon number | 2 |
| gene id | G1052113 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 24630737 ~ 24633618 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1198804 | lncRNA | downstream | 13417 | 24617118 ~ 24617320 (-) | True | LOC110537240 |
| TU1198800 | lncRNA | downstream | 16025 | 24612791 ~ 24614712 (-) | True | LOC110537239 |
| TU1198803 | lncRNA | downstream | 21749 | 24608310 ~ 24608988 (-) | False | LOC110537239 |
| TU1198802 | lncRNA | downstream | 28583 | 24601706 ~ 24602154 (-) | False | LOC118936414 |
| TU1198777 | lncRNA | downstream | 32609 | 24597867 ~ 24598128 (-) | True | G1052080 |
| TU1198825 | lncRNA | upstream | 2159 | 24635777 ~ 24636076 (-) | True | G1052118 |
| TU1200539 | lncRNA | upstream | 215394 | 24849012 ~ 24851195 (-) | True | G1053682 |
| TU1200566 | lncRNA | upstream | 261292 | 24894910 ~ 24895331 (-) | True | G1053709 |
| TU1200592 | lncRNA | upstream | 290956 | 24924574 ~ 24947891 (-) | True | G1053733 |
| TU1200633 | lncRNA | upstream | 403368 | 25036986 ~ 25038594 (-) | True | LOC110537246 |
| XM_021623130.2 | mRNA | downstream | 7325 | 24617183 ~ 24623412 (-) | False | LOC110537240 |
| XM_036937252.1 | mRNA | downstream | 7326 | 24617186 ~ 24623411 (-) | False | LOC110537240 |
| XR_005034921.1 | mRNA | downstream | 13621 | 24608246 ~ 24617116 (-) | False | LOC110537239 |
| XM_021623131.2 | mRNA | upstream | 86766 | 24720384 ~ 24725396 (-) | False | mrm1 |
| XM_021623132.2 | mRNA | upstream | 86766 | 24720384 ~ 24725396 (-) | True | mrm1 |
| LOC110536825 | mRNA | upstream | 94381 | 24727999 ~ 24730374 (-) | True | LOC110536825 |
| NM_001160514.2 | mRNA | upstream | 101293 | 24734911 ~ 24737099 (-) | True | LOC100301685 |
| XM_021623133.2 | mRNA | upstream | 104254 | 24737872 ~ 24746999 (-) | True | LOC110537242 |
| TU1198799 | other | downstream | 22917 | 24604280 ~ 24607820 (-) | True | LOC118936414 |
| TU1198735 | other | downstream | 75737 | 24554697 ~ 24555000 (-) | True | G1052040 |
| TU1197008 | other | downstream | 1386467 | 23243637 ~ 23244270 (-) | True | G1050429 |
| TU1196240 | other | downstream | 1941140 | 22689161 ~ 22689597 (-) | True | G1049722 |
| TU1196153 | other | downstream | 1989138 | 22607861 ~ 22641599 (-) | True | LOC110536820 |
| TU1201112 | other | upstream | 990261 | 25623879 ~ 25624637 (-) | True | G1054211 |
| TU1201136 | other | upstream | 1023651 | 25657269 ~ 25659005 (-) | True | G1054232 |
| TU1201977 | other | upstream | 2347165 | 26980783 ~ 26982355 (-) | True | G1055010 |
| TU1202178 | other | upstream | 2511592 | 27145210 ~ 27145493 (-) | True | G1055199 |
| TU1203334 | other | upstream | 3344408 | 27978026 ~ 27978436 (-) | True | G1056225 |
