Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1210032 |
| length | 321 |
| lncRNA type | inter_gene |
| GC content | 0.44 |
| exon number | 1 |
| gene id | G1062233 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 33220480 ~ 33220800 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1210014 | lncRNA | upstream | 12555 | 33207490 ~ 33207925 (+) | True | G1062215 |
| TU1210006 | lncRNA | upstream | 19331 | 33200845 ~ 33201149 (+) | True | G1062207 |
| TU1210003 | lncRNA | upstream | 21166 | 33199065 ~ 33199314 (+) | True | G1062204 |
| TU1209946 | lncRNA | upstream | 43343 | 33160661 ~ 33177137 (+) | True | G1062148 |
| TU1208848 | lncRNA | upstream | 134427 | 33039534 ~ 33086053 (+) | True | G1061153 |
| TU1210033 | lncRNA | downstream | 1235 | 33222035 ~ 33222248 (+) | True | G1062234 |
| TU1210043 | lncRNA | downstream | 13669 | 33234469 ~ 33234855 (+) | True | G1062244 |
| TU1210064 | lncRNA | downstream | 26353 | 33247153 ~ 33247358 (+) | True | G1062265 |
| TU1210143 | lncRNA | downstream | 112181 | 33332981 ~ 33333240 (+) | True | G1062343 |
| TU1210201 | lncRNA | downstream | 134722 | 33355522 ~ 33357058 (+) | True | G1062401 |
| XM_036937414.1 | mRNA | upstream | 605490 | 32555056 ~ 32614990 (+) | True | cxadr |
| XM_021622431.2 | mRNA | upstream | 665824 | 32547321 ~ 32554656 (+) | True | btg3 |
| NM_001165080.1 | mRNA | upstream | 665827 | 32546918 ~ 32554653 (+) | False | btg3 |
| XM_021623530.2 | mRNA | upstream | 685794 | 32504245 ~ 32534686 (+) | True | LOC110537469 |
| XM_021623528.2 | mRNA | upstream | 749109 | 32458489 ~ 32471371 (+) | True | LOC110537467 |
| XR_002475631.2 | mRNA | downstream | 281134 | 33501934 ~ 33513654 (+) | False | LOC110537474 |
| XM_021623543.2 | mRNA | downstream | 378139 | 33598939 ~ 33624023 (+) | True | rnft1 |
| XM_021623550.2 | mRNA | downstream | 562014 | 33782814 ~ 33784617 (+) | False | ptrh2 |
| XM_021623551.2 | mRNA | downstream | 562069 | 33782869 ~ 33784617 (+) | True | ptrh2 |
| XM_021623555.2 | mRNA | downstream | 652215 | 33873015 ~ 33877401 (+) | False | LOC110537484 |
| TU1208110 | other | upstream | 1409133 | 31811062 ~ 31811347 (+) | True | G1060470 |
| TU1207289 | other | upstream | 2011123 | 31207629 ~ 31209357 (+) | True | G1059685 |
| TU1206610 | other | upstream | 2213414 | 31000227 ~ 31007066 (+) | True | G1059091 |
| TU1206461 | other | upstream | 2341369 | 30848538 ~ 30879111 (+) | True | LOC110537434 |
| TU1206279 | other | upstream | 2703590 | 30516081 ~ 30516890 (+) | True | G1058787 |
| TU1210205 | other | downstream | 138934 | 33359734 ~ 33366249 (+) | False | G1062404 |
| TU1210206 | other | downstream | 138934 | 33359734 ~ 33362605 (+) | False | G1062404 |
| TU1210369 | other | downstream | 287519 | 33508319 ~ 33508863 (+) | True | G1062537 |
| TU1210496 | other | downstream | 437478 | 33658278 ~ 33661949 (+) | True | G1062648 |
| TU1211387 | other | downstream | 1546224 | 34767024 ~ 34770876 (+) | True | ubb |
