Item | Value |
---|---|
RNA id | TCONS_00003997 |
length | 1599 |
RNA type | mRNA |
GC content | 0.38 |
exon number | 6 |
gene id | XLOC_002062 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007121.7 |
NCBI id | CM002894.2 |
chromosome length | 45420867 |
location | 20364009 ~ 20372269 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0006612 | protein targeting to membrane | biological_process |
GO:0043001 | Golgi to plasma membrane protein transport | biological_process |
GO:0018230 | peptidyl-L-cysteine S-palmitoylation | biological_process |
GO:0005795 | Golgi stack | cellular_component |
GO:0002178 | palmitoyltransferase complex | cellular_component |
GO:0019706 | protein-cysteine S-palmitoyltransferase activity | molecular_function |
id | description |
---|---|
ZDB-GENE-040625-142 | Predicted to be involved in Golgi to plasma membrane protein transport; peptidyl-L-cysteine S-palmitoylation; and protein targeting to membrane. Predicted to be located in membrane. Predicted to be part of palmitoyltransferase complex. Predicted to be active in Golgi stack. Orthologous to human GOLGA7 (golgin A7). |
ensembl_id | ENSDART00000080395 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00005869 | lncRNA | upstream | 224106 | 20108557 ~ 20140049 (+) | False | XLOC_002059 |
TCONS_00003992 | lncRNA | upstream | 229275 | 20132370 ~ 20134880 (+) | True | XLOC_002059 |
TCONS_00005865 | lncRNA | upstream | 638561 | 19602396 ~ 19725594 (+) | False | XLOC_002058 |
TCONS_00005870 | lncRNA | downstream | 4946 | 20377088 ~ 20381313 (+) | True | XLOC_002063 |
TCONS_00005871 | lncRNA | downstream | 76325 | 20448467 ~ 20452630 (+) | True | XLOC_002065 |
TCONS_00005704 | lncRNA | downstream | 129634 | 20501776 ~ 20502178 (+) | True | XLOC_002066 |
TCONS_00005872 | lncRNA | downstream | 271193 | 20643335 ~ 20644918 (+) | False | XLOC_002069 |
TCONS_00005873 | lncRNA | downstream | 271718 | 20643860 ~ 20645459 (+) | True | XLOC_002069 |
TCONS_00003995 | mRNA | upstream | 106980 | 20256454 ~ 20257175 (+) | True | XLOC_002061 |
TCONS_00003993 | mRNA | upstream | 129772 | 20180163 ~ 20234383 (+) | False | XLOC_002060 |
TCONS_00003991 | mRNA | upstream | 217611 | 20128267 ~ 20146544 (+) | False | XLOC_002059 |
TCONS_00003989 | mRNA | upstream | 222812 | 20108557 ~ 20141343 (+) | False | XLOC_002059 |
TCONS_00004003 | mRNA | downstream | 19941 | 20392083 ~ 20401485 (+) | False | XLOC_002064 |
TCONS_00004004 | mRNA | downstream | 20514 | 20392656 ~ 20402161 (+) | True | XLOC_002064 |
TCONS_00004005 | mRNA | downstream | 217827 | 20589969 ~ 20609075 (+) | False | XLOC_002067 |
TCONS_00004006 | mRNA | downstream | 218048 | 20590190 ~ 20605986 (+) | False | XLOC_002067 |
TCONS_00004007 | mRNA | downstream | 236534 | 20608676 ~ 20626795 (+) | True | XLOC_002067 |
TCONS_00003994 | other | upstream | 130110 | 20221366 ~ 20234045 (+) | True | XLOC_002060 |
TCONS_00003965 | other | upstream | 1429614 | 18911175 ~ 18934541 (+) | True | XLOC_002047 |
TCONS_00003963 | other | upstream | 1467551 | 18892047 ~ 18896604 (+) | True | XLOC_002046 |
TCONS_00003957 | other | upstream | 2113087 | 18240798 ~ 18251068 (+) | True | XLOC_002043 |
TCONS_00003954 | other | upstream | 2473952 | 17890089 ~ 17890203 (+) | True | XLOC_002040 |
TCONS_00004010 | other | downstream | 311894 | 20684036 ~ 20684150 (+) | True | XLOC_002071 |
TCONS_00004011 | other | downstream | 864422 | 21236564 ~ 21236678 (+) | True | XLOC_002075 |
TCONS_00004013 | other | downstream | 1025178 | 21397320 ~ 21399705 (+) | False | XLOC_002077 |
TCONS_00004014 | other | downstream | 1025225 | 21397367 ~ 21404971 (+) | False | XLOC_002077 |
TCONS_00004015 | other | downstream | 1027573 | 21399715 ~ 21402166 (+) | True | XLOC_002077 |