Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1216492 |
| length | 233 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G1068082 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 38056384 ~ 38056616 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1216427 | lncRNA | downstream | 107803 | 37948363 ~ 37948581 (-) | True | G1068021 |
| TU1216311 | lncRNA | downstream | 280001 | 37774312 ~ 37776383 (-) | True | G1067924 |
| TU1216234 | lncRNA | downstream | 296263 | 37758954 ~ 37760121 (-) | False | G1067872 |
| TU1216235 | lncRNA | downstream | 296263 | 37758954 ~ 37760121 (-) | True | G1067872 |
| TU1216240 | lncRNA | downstream | 341951 | 37713943 ~ 37714433 (-) | True | G1067876 |
| TU1216502 | lncRNA | upstream | 16239 | 38072855 ~ 38073098 (-) | True | G1068091 |
| TU1216503 | lncRNA | upstream | 18240 | 38074856 ~ 38075215 (-) | True | G1068092 |
| TU1216504 | lncRNA | upstream | 22524 | 38079140 ~ 38079979 (-) | True | G1068093 |
| TU1216579 | lncRNA | upstream | 161504 | 38218120 ~ 38218402 (-) | True | G1068166 |
| TU1216581 | lncRNA | upstream | 162760 | 38219376 ~ 38219821 (-) | True | G1068168 |
| XM_036937509.1 | mRNA | downstream | 20904 | 37970263 ~ 38035480 (-) | True | mcama |
| XM_036937510.1 | mRNA | downstream | 20905 | 37970263 ~ 38035479 (-) | False | mcama |
| XM_021623679.2 | mRNA | downstream | 20907 | 37970263 ~ 38035477 (-) | False | mcama |
| XM_021623680.2 | mRNA | downstream | 20907 | 37970263 ~ 38035477 (-) | False | mcama |
| NM_001160575.2 | mRNA | downstream | 117955 | 37936226 ~ 37938429 (-) | True | polr2j |
| XM_021623682.2 | mRNA | upstream | 1159 | 38057775 ~ 38062791 (-) | True | mis12 |
| XM_021623685.2 | mRNA | upstream | 40364 | 38096980 ~ 38104174 (-) | True | LOC110537557 |
| XM_021623690.2 | mRNA | upstream | 102984 | 38159600 ~ 38181614 (-) | False | nup88 |
| XR_005034970.1 | mRNA | upstream | 104563 | 38161179 ~ 38181614 (-) | True | nup88 |
| XR_005034971.1 | mRNA | upstream | 185492 | 38242108 ~ 38247683 (-) | False | LOC118937669 |
| TU1216260 | other | downstream | 350013 | 37672182 ~ 37706371 (-) | True | LOC110539142 |
| TU1216105 | other | downstream | 389130 | 37614168 ~ 37667254 (-) | True | LOC110537546 |
| TU1216102 | other | downstream | 449369 | 37603165 ~ 37607015 (-) | False | LOC110537546 |
| TU1216103 | other | downstream | 449369 | 37603165 ~ 37607015 (-) | False | LOC110537546 |
| TU1216092 | other | downstream | 549240 | 37505880 ~ 37507144 (-) | True | LOC110537540 |
| TU1217947 | other | upstream | 984904 | 39041520 ~ 39072472 (-) | True | LOC110537579 |
| TU1217986 | other | upstream | 1051684 | 39108300 ~ 39108962 (-) | True | G1069456 |
| TU1218083 | other | upstream | 1279488 | 39336104 ~ 39337974 (-) | True | fkbp6 |
| TU1220392 | other | upstream | 2982250 | 41038866 ~ 41039931 (-) | True | G1071725 |
| TU1221758 | other | upstream | 3989247 | 42045863 ~ 42062632 (-) | True | G1073009 |
