Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1218910 |
| length | 214 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G1070284 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 40142531 ~ 40142744 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1218847 | lncRNA | downstream | 87418 | 40054622 ~ 40055113 (-) | True | G1070221 |
| TU1218724 | lncRNA | downstream | 197909 | 39944218 ~ 39944622 (-) | True | G1070100 |
| TU1218538 | lncRNA | downstream | 405707 | 39727777 ~ 39736824 (-) | True | ncam1a |
| TU1218573 | lncRNA | downstream | 425992 | 39716287 ~ 39716539 (-) | True | G1069955 |
| TU1218268 | lncRNA | downstream | 555071 | 39586540 ~ 39587460 (-) | True | G1069693 |
| TU1218923 | lncRNA | upstream | 9440 | 40152184 ~ 40152501 (-) | True | G1070297 |
| TU1218930 | lncRNA | upstream | 13054 | 40155798 ~ 40156116 (-) | True | G1070304 |
| TU1218934 | lncRNA | upstream | 14850 | 40157594 ~ 40157838 (-) | True | G1070308 |
| TU1218935 | lncRNA | upstream | 15849 | 40158593 ~ 40158812 (-) | True | G1070309 |
| TU1219074 | lncRNA | upstream | 120406 | 40263150 ~ 40263365 (-) | True | G1070439 |
| XM_036937580.1 | mRNA | downstream | 99042 | 39727774 ~ 40043489 (-) | False | ncam1a |
| XM_036937569.1 | mRNA | downstream | 99043 | 39727774 ~ 40043488 (-) | False | ncam1a |
| XM_036937573.1 | mRNA | downstream | 99043 | 39727774 ~ 40043488 (-) | False | ncam1a |
| XM_036937574.1 | mRNA | downstream | 99044 | 39727774 ~ 40043487 (-) | False | ncam1a |
| XM_036937596.1 | mRNA | upstream | 950438 | 41093182 ~ 41098902 (-) | False | sc5d |
| XM_021623781.2 | mRNA | upstream | 950438 | 41093182 ~ 41101786 (-) | False | sc5d |
| XM_021623779.2 | mRNA | upstream | 950438 | 41093182 ~ 41101891 (-) | False | sc5d |
| XM_021623780.2 | mRNA | upstream | 950438 | 41093182 ~ 41101891 (-) | True | sc5d |
| XR_005035323.1 | mRNA | upstream | 951838 | 41094582 ~ 41094719 (-) | True | LOC118937914 |
| TU1218083 | other | downstream | 804557 | 39336104 ~ 39337974 (-) | True | fkbp6 |
| TU1217986 | other | downstream | 1033569 | 39108300 ~ 39108962 (-) | True | G1069456 |
| TU1217947 | other | downstream | 1070059 | 39041520 ~ 39072472 (-) | True | LOC110537579 |
| TU1216260 | other | downstream | 2436160 | 37672182 ~ 37706371 (-) | True | LOC110539142 |
| TU1216105 | other | downstream | 2475277 | 37614168 ~ 37667254 (-) | True | LOC110537546 |
| TU1220392 | other | upstream | 896122 | 41038866 ~ 41039931 (-) | True | G1071725 |
| TU1221758 | other | upstream | 1903119 | 42045863 ~ 42062632 (-) | True | G1073009 |
| TU1223569 | other | upstream | 2561259 | 42704003 ~ 42713923 (-) | True | G1074731 |
| TU1224206 | other | upstream | 3421041 | 43563785 ~ 43564240 (-) | True | G1075335 |
| TU1224273 | other | upstream | 3517815 | 43660559 ~ 43660837 (-) | True | G1075399 |
