Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1219344 |
| length | 386 |
| lncRNA type | inter_gene |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G1070703 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 40446379 ~ 40446764 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1219328 | lncRNA | downstream | 7729 | 40438424 ~ 40438650 (-) | True | G1070687 |
| TU1219313 | lncRNA | downstream | 15274 | 40430827 ~ 40431105 (-) | True | G1070672 |
| TU1219296 | lncRNA | downstream | 31877 | 40413207 ~ 40414502 (-) | True | G1070655 |
| TU1219230 | lncRNA | downstream | 105172 | 40340901 ~ 40341207 (-) | True | G1070590 |
| TU1219098 | lncRNA | downstream | 165188 | 40280991 ~ 40281191 (-) | True | G1070463 |
| TU1220089 | lncRNA | upstream | 171774 | 40618538 ~ 40674523 (-) | True | G1071425 |
| TU1220278 | lncRNA | upstream | 429347 | 40876111 ~ 40938063 (-) | False | G1071612 |
| TU1220277 | lncRNA | upstream | 487126 | 40933890 ~ 40938063 (-) | True | G1071612 |
| TU1220322 | lncRNA | upstream | 494766 | 40941530 ~ 40941762 (-) | True | G1071656 |
| TU1220330 | lncRNA | upstream | 505057 | 40951821 ~ 40952094 (-) | True | G1071664 |
| XM_036937580.1 | mRNA | downstream | 402890 | 39727774 ~ 40043489 (-) | False | ncam1a |
| XM_036937569.1 | mRNA | downstream | 402891 | 39727774 ~ 40043488 (-) | False | ncam1a |
| XM_036937573.1 | mRNA | downstream | 402891 | 39727774 ~ 40043488 (-) | False | ncam1a |
| XM_036937574.1 | mRNA | downstream | 402892 | 39727774 ~ 40043487 (-) | False | ncam1a |
| XM_036937596.1 | mRNA | upstream | 646418 | 41093182 ~ 41098902 (-) | False | sc5d |
| XM_021623781.2 | mRNA | upstream | 646418 | 41093182 ~ 41101786 (-) | False | sc5d |
| XM_021623779.2 | mRNA | upstream | 646418 | 41093182 ~ 41101891 (-) | False | sc5d |
| XM_021623780.2 | mRNA | upstream | 646418 | 41093182 ~ 41101891 (-) | True | sc5d |
| XR_005035323.1 | mRNA | upstream | 647818 | 41094582 ~ 41094719 (-) | True | LOC118937914 |
| TU1218083 | other | downstream | 1108405 | 39336104 ~ 39337974 (-) | True | fkbp6 |
| TU1217986 | other | downstream | 1337417 | 39108300 ~ 39108962 (-) | True | G1069456 |
| TU1217947 | other | downstream | 1373907 | 39041520 ~ 39072472 (-) | True | LOC110537579 |
| TU1216260 | other | downstream | 2740008 | 37672182 ~ 37706371 (-) | True | LOC110539142 |
| TU1216105 | other | downstream | 2779125 | 37614168 ~ 37667254 (-) | True | LOC110537546 |
| TU1220392 | other | upstream | 592102 | 41038866 ~ 41039931 (-) | True | G1071725 |
| TU1221758 | other | upstream | 1599099 | 42045863 ~ 42062632 (-) | True | G1073009 |
| TU1223569 | other | upstream | 2257239 | 42704003 ~ 42713923 (-) | True | G1074731 |
| TU1224206 | other | upstream | 3117021 | 43563785 ~ 43564240 (-) | True | G1075335 |
| TU1224273 | other | upstream | 3213795 | 43660559 ~ 43660837 (-) | True | G1075399 |
