Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1220435 |
| length | 331 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G1071767 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 41083272 ~ 41083602 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1220389 | lncRNA | downstream | 47133 | 41035918 ~ 41036139 (-) | True | G1071722 |
| TU1220386 | lncRNA | downstream | 51525 | 41031540 ~ 41031747 (-) | True | G1071719 |
| TU1220383 | lncRNA | downstream | 53817 | 41029250 ~ 41029455 (-) | True | G1071716 |
| TU1220380 | lncRNA | downstream | 58696 | 41024349 ~ 41024576 (-) | True | G1071713 |
| TU1220373 | lncRNA | downstream | 68386 | 41014581 ~ 41014886 (-) | True | G1071707 |
| TU1220438 | lncRNA | upstream | 2917 | 41086519 ~ 41087028 (-) | True | G1071770 |
| TU1220440 | lncRNA | upstream | 5671 | 41089273 ~ 41089472 (-) | True | G1071772 |
| TU1220449 | lncRNA | upstream | 24436 | 41108038 ~ 41108329 (-) | True | G1071781 |
| TU1220451 | lncRNA | upstream | 26187 | 41109789 ~ 41110015 (-) | True | G1071783 |
| TU1220453 | lncRNA | upstream | 30126 | 41113728 ~ 41114069 (-) | True | G1071785 |
| XM_036937580.1 | mRNA | downstream | 1039783 | 39727774 ~ 40043489 (-) | False | ncam1a |
| XM_036937569.1 | mRNA | downstream | 1039784 | 39727774 ~ 40043488 (-) | False | ncam1a |
| XM_036937573.1 | mRNA | downstream | 1039784 | 39727774 ~ 40043488 (-) | False | ncam1a |
| XM_036937574.1 | mRNA | downstream | 1039785 | 39727774 ~ 40043487 (-) | False | ncam1a |
| XM_036937596.1 | mRNA | upstream | 9580 | 41093182 ~ 41098902 (-) | False | sc5d |
| XM_021623781.2 | mRNA | upstream | 9580 | 41093182 ~ 41101786 (-) | False | sc5d |
| XM_021623779.2 | mRNA | upstream | 9580 | 41093182 ~ 41101891 (-) | False | sc5d |
| XM_021623780.2 | mRNA | upstream | 9580 | 41093182 ~ 41101891 (-) | True | sc5d |
| XR_005035323.1 | mRNA | upstream | 10980 | 41094582 ~ 41094719 (-) | True | LOC118937914 |
| TU1220392 | other | downstream | 43341 | 41038866 ~ 41039931 (-) | True | G1071725 |
| TU1218083 | other | downstream | 1745298 | 39336104 ~ 39337974 (-) | True | fkbp6 |
| TU1217986 | other | downstream | 1974310 | 39108300 ~ 39108962 (-) | True | G1069456 |
| TU1217947 | other | downstream | 2010800 | 39041520 ~ 39072472 (-) | True | LOC110537579 |
| TU1216260 | other | downstream | 3376901 | 37672182 ~ 37706371 (-) | True | LOC110539142 |
| TU1221758 | other | upstream | 962261 | 42045863 ~ 42062632 (-) | True | G1073009 |
| TU1223569 | other | upstream | 1620401 | 42704003 ~ 42713923 (-) | True | G1074731 |
| TU1224206 | other | upstream | 2480183 | 43563785 ~ 43564240 (-) | True | G1075335 |
| TU1224273 | other | upstream | 2576957 | 43660559 ~ 43660837 (-) | True | G1075399 |
| TU1224387 | other | upstream | 2690462 | 43774064 ~ 43774425 (-) | True | G1075509 |
