Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1228724 |
| length | 229 |
| lncRNA type | inter_gene |
| GC content | 0.50 |
| exon number | 1 |
| gene id | G1079513 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 47358418 ~ 47358646 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1228717 | lncRNA | downstream | 1864 | 47346637 ~ 47356554 (-) | True | G1079506 |
| TU1228597 | lncRNA | downstream | 166860 | 47191330 ~ 47191558 (-) | True | G1079391 |
| TU1228596 | lncRNA | downstream | 167164 | 47190782 ~ 47191254 (-) | True | G1079390 |
| TU1228551 | lncRNA | downstream | 215704 | 47141522 ~ 47142714 (-) | True | G1079345 |
| TU1228437 | lncRNA | downstream | 378445 | 46975055 ~ 46979973 (-) | True | G1079234 |
| TU1228725 | lncRNA | upstream | 640 | 47359286 ~ 47359608 (-) | True | G1079514 |
| TU1228727 | lncRNA | upstream | 3892 | 47362538 ~ 47365152 (-) | True | G1079516 |
| TU1228745 | lncRNA | upstream | 14628 | 47373274 ~ 47373539 (-) | True | G1079534 |
| TU1229348 | lncRNA | upstream | 174420 | 47533066 ~ 47533377 (-) | True | G1080102 |
| TU1229361 | lncRNA | upstream | 187239 | 47545885 ~ 47546201 (-) | True | G1080115 |
| XM_021623939.2 | mRNA | downstream | 61383 | 46911457 ~ 47297035 (-) | True | LOC110537699 |
| XM_021623937.2 | mRNA | downstream | 327981 | 46911457 ~ 47030437 (-) | False | LOC110537699 |
| XM_036937660.1 | mRNA | downstream | 668837 | 46600848 ~ 46689581 (-) | False | LOC110537698 |
| XM_036937661.1 | mRNA | downstream | 668837 | 46601173 ~ 46689581 (-) | True | LOC110537698 |
| XM_021623935.2 | mRNA | downstream | 668838 | 46382502 ~ 46689580 (-) | False | LOC110537698 |
| XM_036937662.1 | mRNA | upstream | 268010 | 47626656 ~ 47658364 (-) | False | LOC110537700 |
| XM_021623940.2 | mRNA | upstream | 268010 | 47626656 ~ 47658365 (-) | True | LOC110537700 |
| XM_021623949.2 | mRNA | upstream | 304398 | 47663044 ~ 47699551 (-) | False | LOC110537701 |
| XM_021623946.2 | mRNA | upstream | 304398 | 47663044 ~ 47708268 (-) | False | LOC110537701 |
| XM_021623942.2 | mRNA | upstream | 304398 | 47663044 ~ 47711070 (-) | False | LOC110537701 |
| TU1227962 | other | downstream | 541353 | 46816443 ~ 46817065 (-) | True | G1078783 |
| TU1227478 | other | downstream | 1152330 | 46202604 ~ 46206088 (-) | True | G1078323 |
| TU1225874 | other | downstream | 2205081 | 45133852 ~ 45153337 (-) | True | gria4b |
| TU1225480 | other | downstream | 2757530 | 44546519 ~ 44600888 (-) | False | LOC110537661 |
| TU1229609 | other | upstream | 555905 | 47914551 ~ 47922446 (-) | True | LOC110537706 |
| TU1230355 | other | upstream | 1059775 | 48418421 ~ 48418884 (-) | True | G1081055 |
| TU1230892 | other | upstream | 1542762 | 48901408 ~ 48905274 (-) | True | G1081571 |
| TU1231158 | other | upstream | 1629366 | 48988012 ~ 48988353 (-) | True | G1081813 |
| TU1231174 | other | upstream | 1650703 | 49009349 ~ 49010152 (-) | True | G1081829 |
