Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1229371 |
| length | 228 |
| lncRNA type | inter_gene |
| GC content | 0.42 |
| exon number | 1 |
| gene id | G1080125 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 47554568 ~ 47554795 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1229367 | lncRNA | downstream | 1386 | 47552904 ~ 47553182 (-) | True | G1080121 |
| TU1229363 | lncRNA | downstream | 7212 | 47547097 ~ 47547356 (-) | True | G1080117 |
| TU1229361 | lncRNA | downstream | 8367 | 47545885 ~ 47546201 (-) | True | G1080115 |
| TU1229348 | lncRNA | downstream | 21191 | 47533066 ~ 47533377 (-) | True | G1080102 |
| TU1228745 | lncRNA | downstream | 181029 | 47373274 ~ 47373539 (-) | True | G1079534 |
| TU1229372 | lncRNA | upstream | 1328 | 47556123 ~ 47556411 (-) | True | G1080126 |
| TU1229374 | lncRNA | upstream | 3791 | 47558586 ~ 47631597 (-) | True | G1080128 |
| TU1229447 | lncRNA | upstream | 157571 | 47712366 ~ 47719560 (-) | True | LOC110537702 |
| TU1229509 | lncRNA | upstream | 239676 | 47794471 ~ 47801610 (-) | True | G1080244 |
| TU1229513 | lncRNA | upstream | 275326 | 47830121 ~ 47831801 (-) | True | G1080246 |
| XM_021623939.2 | mRNA | downstream | 257533 | 46911457 ~ 47297035 (-) | True | LOC110537699 |
| XM_021623937.2 | mRNA | downstream | 524131 | 46911457 ~ 47030437 (-) | False | LOC110537699 |
| XM_036937660.1 | mRNA | downstream | 864987 | 46600848 ~ 46689581 (-) | False | LOC110537698 |
| XM_036937661.1 | mRNA | downstream | 864987 | 46601173 ~ 46689581 (-) | True | LOC110537698 |
| XM_021623935.2 | mRNA | downstream | 864988 | 46382502 ~ 46689580 (-) | False | LOC110537698 |
| XM_036937662.1 | mRNA | upstream | 71861 | 47626656 ~ 47658364 (-) | False | LOC110537700 |
| XM_021623940.2 | mRNA | upstream | 71861 | 47626656 ~ 47658365 (-) | True | LOC110537700 |
| XM_021623949.2 | mRNA | upstream | 108249 | 47663044 ~ 47699551 (-) | False | LOC110537701 |
| XM_021623946.2 | mRNA | upstream | 108249 | 47663044 ~ 47708268 (-) | False | LOC110537701 |
| XM_021623942.2 | mRNA | upstream | 108249 | 47663044 ~ 47711070 (-) | False | LOC110537701 |
| TU1227962 | other | downstream | 737503 | 46816443 ~ 46817065 (-) | True | G1078783 |
| TU1227478 | other | downstream | 1348480 | 46202604 ~ 46206088 (-) | True | G1078323 |
| TU1225874 | other | downstream | 2401231 | 45133852 ~ 45153337 (-) | True | gria4b |
| TU1225480 | other | downstream | 2953680 | 44546519 ~ 44600888 (-) | False | LOC110537661 |
| TU1229609 | other | upstream | 359756 | 47914551 ~ 47922446 (-) | True | LOC110537706 |
| TU1230355 | other | upstream | 863626 | 48418421 ~ 48418884 (-) | True | G1081055 |
| TU1230892 | other | upstream | 1346613 | 48901408 ~ 48905274 (-) | True | G1081571 |
| TU1231158 | other | upstream | 1433217 | 48988012 ~ 48988353 (-) | True | G1081813 |
| TU1231174 | other | upstream | 1454554 | 49009349 ~ 49010152 (-) | True | G1081829 |
