Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1238770 |
| length | 314 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G1088992 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 54992764 ~ 55001431 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1238646 | lncRNA | upstream | 73768 | 54890174 ~ 54918996 (+) | True | G1088883 |
| TU1238666 | lncRNA | upstream | 103194 | 54867931 ~ 54889570 (+) | True | G1088896 |
| TU1238625 | lncRNA | upstream | 151126 | 54838201 ~ 54841638 (+) | True | G1088877 |
| TU1237924 | lncRNA | upstream | 309809 | 54681981 ~ 54682955 (+) | True | G1088217 |
| TU1237858 | lncRNA | upstream | 450130 | 54517301 ~ 54542634 (+) | True | G1088152 |
| TU1238789 | lncRNA | downstream | 23377 | 55024808 ~ 55025073 (+) | True | G1089011 |
| TU1238791 | lncRNA | downstream | 26233 | 55027664 ~ 55027888 (+) | True | G1089013 |
| TU1238837 | lncRNA | downstream | 112763 | 55114194 ~ 55114513 (+) | True | G1089056 |
| TU1238664 | lncRNA | downstream | 188319 | 55189750 ~ 55205645 (+) | True | G1088894 |
| TU1238657 | lncRNA | downstream | 192104 | 55193535 ~ 55196940 (+) | True | G1088887 |
| XM_021624177.2 | mRNA | upstream | 104130 | 54879673 ~ 54888634 (+) | False | LOC110537791 |
| XR_005035008.1 | mRNA | upstream | 104130 | 54879673 ~ 54888634 (+) | False | LOC110537791 |
| XM_036937822.1 | mRNA | upstream | 104130 | 54879674 ~ 54888634 (+) | False | LOC110537791 |
| XM_021624178.2 | mRNA | upstream | 104130 | 54879912 ~ 54888634 (+) | True | LOC110537791 |
| XM_036937802.1 | mRNA | upstream | 532162 | 54439886 ~ 54460602 (+) | True | ppp2r2bb |
| XM_021622407.2 | mRNA | downstream | 45729 | 55047160 ~ 55052488 (+) | False | LOC100136153 |
| XM_036936676.1 | mRNA | downstream | 45729 | 55047160 ~ 55052488 (+) | False | LOC100136153 |
| NM_001124440.1 | mRNA | downstream | 47796 | 55049227 ~ 55050456 (+) | True | LOC100136153 |
| XM_036937825.1 | mRNA | downstream | 63690 | 55065121 ~ 55209632 (+) | False | LOC110537795 |
| XM_036937826.1 | mRNA | downstream | 63690 | 55065121 ~ 55209632 (+) | False | LOC110537795 |
| TU1237658 | other | upstream | 712043 | 54274306 ~ 54280721 (+) | True | LOC110538908 |
| TU1237606 | other | upstream | 843802 | 54109690 ~ 54148962 (+) | True | G1087914 |
| TU1235839 | other | upstream | 2335269 | 52649604 ~ 52657495 (+) | True | G1086237 |
| TU1231639 | other | upstream | 5311960 | 49679023 ~ 49680804 (+) | True | G1082266 |
| TU1231371 | other | upstream | 5692417 | 49291405 ~ 49300347 (+) | True | LOC110537713 |
| TU1241153 | other | downstream | 1724176 | 56725607 ~ 56726003 (+) | True | G1091217 |
| TU1241171 | other | downstream | 1750987 | 56752418 ~ 56752947 (+) | True | G1091235 |
| TU1241421 | other | downstream | 2114394 | 57115825 ~ 57117927 (+) | True | LOC110537831 |
| TU1241907 | other | downstream | 2898040 | 57899471 ~ 57914832 (+) | True | LOC110537841 |
| TU1241903 | other | downstream | 3214724 | 58216155 ~ 58222190 (+) | False | LOC118937686 |
