RNA id: TCONS_00041035


Basic Information

Item Value
RNA id TCONS_00041035
length 117
RNA type rRNA
GC content 0.49
exon number 1
gene id XLOC_020825
representative True

Chromosome Information

Item Value
chromosome id NC_007133.7
NCBI id CM002906.2
chromosome length 39133080
location 6476142 ~ 6476258 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

TTTTACAGctatgtcaccctgcagcccaagaccggtttcTCATGgaaactaagcagggctgagcatggtcagtaccttgatgggagaccacatgggaaaactaggttactgttggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000178005

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00042322 lncRNA downstream 76425 6397413 ~ 6399717 (-) True XLOC_020821
TCONS_00042321 lncRNA downstream 229403 6243742 ~ 6246739 (-) True XLOC_020815
TCONS_00042320 lncRNA downstream 308190 6154675 ~ 6167952 (-) True XLOC_020810
TCONS_00042319 lncRNA downstream 409886 6064870 ~ 6066256 (-) False XLOC_020806
TCONS_00042318 lncRNA downstream 466320 5977406 ~ 6009822 (-) True XLOC_020803
TCONS_00041039 lncRNA upstream 51156 6527414 ~ 6529377 (-) True XLOC_020828
TCONS_00041938 lncRNA upstream 87388 6563646 ~ 6565961 (-) True XLOC_020830
TCONS_00042323 lncRNA upstream 220259 6696517 ~ 6711516 (-) True XLOC_020834
TCONS_00042324 lncRNA upstream 251282 6727540 ~ 6753026 (-) True XLOC_020835
TCONS_00041046 lncRNA upstream 333108 6809366 ~ 6813803 (-) False XLOC_020838
TCONS_00041034 mRNA downstream 11082 6456003 ~ 6465060 (-) True XLOC_020824
TCONS_00041032 mRNA downstream 30281 6434672 ~ 6445861 (-) False XLOC_020823
TCONS_00041033 mRNA downstream 31335 6442226 ~ 6444807 (-) True XLOC_020823
TCONS_00041031 mRNA downstream 55903 6407445 ~ 6420239 (-) True XLOC_020822
TCONS_00041028 mRNA downstream 71236 6393227 ~ 6404906 (-) False XLOC_020820
TCONS_00041036 mRNA upstream 10790 6487048 ~ 6499077 (-) False XLOC_020826
TCONS_00041037 mRNA upstream 11301 6487559 ~ 6499055 (-) True XLOC_020826
TCONS_00041040 mRNA upstream 70439 6546697 ~ 6562618 (-) True XLOC_020829
TCONS_00041042 mRNA upstream 156444 6632702 ~ 6651382 (-) True XLOC_020832
TCONS_00041044 mRNA upstream 288722 6764980 ~ 6777976 (-) True XLOC_020836
TCONS_00041030 other downstream 71232 6401579 ~ 6404910 (-) True XLOC_020820
TCONS_00041022 other downstream 159163 6300311 ~ 6316979 (-) False XLOC_020818
TCONS_00041024 other downstream 159181 6313773 ~ 6316961 (-) True XLOC_020818
TCONS_00041023 other downstream 171079 6301699 ~ 6305063 (-) False XLOC_020818
TCONS_00041020 other downstream 193953 6273581 ~ 6282189 (-) True XLOC_020816
TCONS_00041038 other upstream 39139 6515397 ~ 6520026 (-) True XLOC_020827
TCONS_00041041 other upstream 111292 6587550 ~ 6601587 (-) True XLOC_020831
TCONS_00041043 other upstream 185454 6661712 ~ 6662906 (-) True XLOC_020833
TCONS_00041072 other upstream 1138414 7614672 ~ 7617991 (-) False XLOC_020858
TCONS_00041073 other upstream 1139481 7615739 ~ 7617991 (-) True XLOC_020858