Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00004032 |
| length | 723 |
| RNA type | mRNA |
| GC content | 0.39 |
| exon number | 2 |
| gene id | XLOC_002082 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_007121.7 |
| NCBI id | CM002894.2 |
| chromosome length | 45420867 |
| location | 21559605 ~ 21649172 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007155 | cell adhesion | biological_process |
| GO:0005887 | integral component of plasma membrane | cellular_component |
| id | description |
|---|---|
| ZDB-GENE-050203-2 | Predicted to enable calcium ion binding activity. Predicted to be involved in cell adhesion. Predicted to act upstream of or within homophilic cell adhesion via plasma membrane adhesion molecules and nervous system development. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. |
| ensembl_id | ENSDART00000100599 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00005879 | lncRNA | upstream | 40633 | 21542521 ~ 21543562 (+) | True | XLOC_002081 |
| TCONS_00004023 | lncRNA | upstream | 132060 | 21444665 ~ 21452135 (+) | False | XLOC_002078 |
| TCONS_00005877 | lncRNA | upstream | 375995 | 21179484 ~ 21208200 (+) | False | XLOC_002074 |
| TCONS_00005878 | lncRNA | upstream | 395059 | 21179547 ~ 21189136 (+) | True | XLOC_002074 |
| TCONS_00005876 | lncRNA | upstream | 477485 | 21103921 ~ 21106710 (+) | True | XLOC_002073 |
| TCONS_00004040 | lncRNA | downstream | 22180 | 21670863 ~ 21672339 (+) | False | XLOC_002085 |
| TCONS_00004041 | lncRNA | downstream | 22536 | 21671219 ~ 21674300 (+) | False | XLOC_002085 |
| TCONS_00004043 | lncRNA | downstream | 23570 | 21672253 ~ 21674458 (+) | True | XLOC_002085 |
| TCONS_00005705 | lncRNA | downstream | 96579 | 21745262 ~ 21745505 (+) | True | XLOC_002088 |
| TCONS_00004074 | lncRNA | downstream | 218624 | 21867307 ~ 21868226 (+) | False | XLOC_002089 |
| TCONS_00004026 | mRNA | upstream | 53520 | 21522545 ~ 21530675 (+) | True | XLOC_002080 |
| TCONS_00004025 | mRNA | upstream | 62688 | 21511495 ~ 21521507 (+) | True | XLOC_002079 |
| TCONS_00004022 | mRNA | upstream | 113602 | 21444654 ~ 21470593 (+) | False | XLOC_002078 |
| TCONS_00004024 | mRNA | upstream | 113605 | 21444665 ~ 21470590 (+) | True | XLOC_002078 |
| TCONS_00004017 | mRNA | upstream | 140311 | 21434717 ~ 21443884 (+) | False | XLOC_002078 |
| TCONS_00004034 | mRNA | downstream | 2145 | 21650828 ~ 21820057 (+) | False | XLOC_002083 |
| TCONS_00004035 | mRNA | downstream | 7971 | 21656654 ~ 21820057 (+) | False | XLOC_002083 |
| TCONS_00004036 | mRNA | downstream | 11764 | 21660447 ~ 21820057 (+) | False | XLOC_002083 |
| TCONS_00004037 | mRNA | downstream | 19923 | 21668606 ~ 21676419 (+) | True | XLOC_002084 |
| TCONS_00004044 | mRNA | downstream | 28375 | 21677058 ~ 21699175 (+) | False | XLOC_002083 |
| TCONS_00004021 | other | upstream | 140783 | 21440978 ~ 21443412 (+) | False | XLOC_002078 |
| TCONS_00004018 | other | upstream | 141083 | 21434790 ~ 21443112 (+) | False | XLOC_002078 |
| TCONS_00004019 | other | upstream | 146885 | 21434791 ~ 21437310 (+) | False | XLOC_002078 |
| TCONS_00004020 | other | upstream | 148219 | 21434794 ~ 21435976 (+) | False | XLOC_002078 |
| TCONS_00004015 | other | upstream | 182029 | 21399715 ~ 21402166 (+) | True | XLOC_002077 |
| TCONS_00004038 | other | downstream | 22148 | 21670831 ~ 21674289 (+) | False | XLOC_002085 |
| TCONS_00004039 | other | downstream | 22174 | 21670857 ~ 21673021 (+) | False | XLOC_002085 |
| TCONS_00004042 | other | downstream | 22539 | 21671222 ~ 21674289 (+) | False | XLOC_002085 |
| TCONS_00004046 | other | downstream | 52868 | 21701551 ~ 21818605 (+) | False | XLOC_002083 |
| TCONS_00004047 | other | downstream | 52868 | 21701551 ~ 21820057 (+) | False | XLOC_002083 |
