Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1288932 |
| length | 679 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 3 |
| gene id | G1132342 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 99046418 ~ 99047786 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1288922 | lncRNA | downstream | 12880 | 99033293 ~ 99033538 (-) | True | G1132339 |
| TU1288915 | lncRNA | downstream | 18461 | 99022927 ~ 99027957 (-) | True | LOC110538838 |
| TU1288914 | lncRNA | downstream | 21026 | 99022927 ~ 99025392 (-) | False | LOC110538838 |
| TU1288887 | lncRNA | downstream | 26845 | 99017082 ~ 99019573 (-) | True | LOC110539185 |
| TU1288908 | lncRNA | downstream | 33502 | 99011586 ~ 99012916 (-) | True | G1132330 |
| TU1288925 | lncRNA | upstream | 501 | 99048287 ~ 99049270 (-) | False | G1132340 |
| TU1288927 | lncRNA | upstream | 501 | 99048287 ~ 99051795 (-) | False | G1132340 |
| TU1288928 | lncRNA | upstream | 501 | 99048287 ~ 99051795 (-) | False | G1132340 |
| TU1288929 | lncRNA | upstream | 501 | 99048287 ~ 99049270 (-) | True | G1132340 |
| TU1288930 | lncRNA | upstream | 5104 | 99052890 ~ 99053438 (-) | False | LOC118937838 |
| XR_005035258.1 | mRNA | downstream | 798 | 99042019 ~ 99045620 (-) | True | LOC110538834 |
| XM_036939473.1 | mRNA | downstream | 799 | 99042019 ~ 99045619 (-) | False | LOC110538834 |
| XM_036939474.1 | mRNA | downstream | 1546 | 99042019 ~ 99044872 (-) | False | LOC110538834 |
| XM_036939471.1 | mRNA | downstream | 5584 | 99028168 ~ 99040834 (-) | True | btr02 |
| XM_036939470.1 | mRNA | downstream | 9756 | 99028168 ~ 99036662 (-) | False | btr02 |
| XM_036939569.1 | mRNA | upstream | 5498 | 99053284 ~ 99058841 (-) | False | LOC118937838 |
| XM_021625818.2 | mRNA | upstream | 42835 | 99090621 ~ 99092245 (-) | False | LOC110538840 |
| XM_021625826.2 | mRNA | upstream | 130300 | 99178086 ~ 99183106 (-) | False | LOC110538845 |
| XR_005035259.1 | mRNA | upstream | 130300 | 99178086 ~ 99183106 (-) | False | LOC110538845 |
| XM_036939487.1 | mRNA | upstream | 170828 | 99218614 ~ 99231888 (-) | True | LOC110517411 |
| TU1288904 | other | downstream | 36306 | 99006627 ~ 99010112 (-) | True | G1132328 |
| TU1288236 | other | downstream | 662603 | 98382970 ~ 98383815 (-) | True | G1131863 |
| TU1288159 | other | downstream | 786731 | 98258882 ~ 98259687 (-) | True | LOC118936513 |
| TU1287948 | other | downstream | 1071698 | 97959792 ~ 97974720 (-) | True | LOC110485313 |
| TU1287949 | other | downstream | 1185900 | 97857599 ~ 97860518 (-) | True | G1131666 |
| TU1288947 | other | upstream | 5718 | 99053504 ~ 99059256 (-) | True | LOC118937838 |
| TU1289169 | other | upstream | 43930 | 99091716 ~ 99092238 (-) | True | LOC110538840 |
| TU1289204 | other | upstream | 118162 | 99165948 ~ 99166607 (-) | True | G1132564 |
| TU1289215 | other | upstream | 125879 | 99173665 ~ 99175908 (-) | False | G1132569 |
| TU1289219 | other | upstream | 134175 | 99181961 ~ 99182915 (-) | False | LOC110538845 |
