Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1289879 |
| length | 281 |
| lncRNA type | read_through |
| GC content | 0.40 |
| exon number | 2 |
| gene id | G1133030 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 99930621 ~ 99943583 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1289872 | lncRNA | downstream | 10753 | 99917674 ~ 99919868 (-) | False | G1133026 |
| TU1289873 | lncRNA | downstream | 10753 | 99917793 ~ 99919868 (-) | True | G1133026 |
| TU1289856 | lncRNA | downstream | 44402 | 99886000 ~ 99886219 (-) | True | G1133012 |
| TU1289853 | lncRNA | downstream | 46703 | 99882572 ~ 99883918 (-) | True | G1133009 |
| TU1289852 | lncRNA | downstream | 50045 | 99878878 ~ 99880576 (-) | True | G1133008 |
| TU1289837 | lncRNA | upstream | 32059 | 99975642 ~ 99976958 (-) | True | G1132996 |
| TU1289893 | lncRNA | upstream | 45966 | 99989549 ~ 99990363 (-) | True | G1133042 |
| TU1289896 | lncRNA | upstream | 47997 | 99991580 ~ 99991845 (-) | True | G1133043 |
| TU1289897 | lncRNA | upstream | 51500 | 99995083 ~ 99995357 (-) | True | G1133044 |
| TU1289899 | lncRNA | upstream | 57830 | 100001413 ~ 100002086 (-) | True | G1133046 |
| XR_005035282.1 | mRNA | downstream | 73365 | 99850156 ~ 99857256 (-) | False | LOC110538873 |
| XM_036939642.1 | mRNA | downstream | 257983 | 99639639 ~ 99672638 (-) | True | LOC110485298 |
| XM_036939577.1 | mRNA | downstream | 299548 | 99563732 ~ 99631073 (-) | False | LOC118937841 |
| XM_036939637.1 | mRNA | downstream | 325963 | 99603751 ~ 99604658 (-) | True | LOC118937859 |
| XM_036939489.1 | mRNA | downstream | 374306 | 99539308 ~ 99556315 (-) | True | LOC110538877 |
| XM_036939601.1 | mRNA | upstream | 3153 | 99946736 ~ 99965247 (-) | True | LOC110539071 |
| XR_005035275.1 | mRNA | upstream | 22840 | 99966423 ~ 99968463 (-) | True | LOC118937866 |
| XM_036939620.1 | mRNA | upstream | 26091 | 99969674 ~ 99985905 (-) | True | LOC110539073 |
| XM_036939630.1 | mRNA | upstream | 314647 | 100258230 ~ 100295591 (-) | False | LOC118937853 |
| XM_036939635.1 | mRNA | upstream | 490668 | 100434251 ~ 100462726 (-) | True | carhsp1 |
| TU1289875 | other | downstream | 5495 | 99924060 ~ 99925126 (-) | False | G1133028 |
| TU1289877 | other | downstream | 5969 | 99924060 ~ 99924652 (-) | True | G1133028 |
| TU1289697 | other | downstream | 83635 | 99840439 ~ 99846986 (-) | False | LOC110539068 |
| TU1289696 | other | downstream | 87695 | 99840439 ~ 99842926 (-) | False | LOC110539068 |
| TU1289296 | other | downstream | 603697 | 99326512 ~ 99326924 (-) | True | G1132625 |
| TU1291316 | other | upstream | 266874 | 100210457 ~ 100211148 (-) | True | G1134054 |
| TU1291344 | other | upstream | 315071 | 100258654 ~ 100295566 (-) | True | LOC118937853 |
| TU1291428 | other | upstream | 477374 | 100420957 ~ 100423066 (-) | True | G1134117 |
| TU1291514 | other | upstream | 560022 | 100503605 ~ 100504088 (-) | True | G1134183 |
| TU1291403 | other | upstream | 591267 | 100534850 ~ 100543369 (-) | False | eci1 |
