Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1291314 |
| length | 409 |
| lncRNA type | intronic |
| GC content | 0.53 |
| exon number | 1 |
| gene id | G1134052 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 100205326 ~ 100205734 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1291312 | lncRNA | downstream | 7344 | 100197279 ~ 100197982 (-) | True | G1134050 |
| TU1291310 | lncRNA | downstream | 7422 | 100196958 ~ 100197904 (-) | False | G1134050 |
| TU1291309 | lncRNA | downstream | 7422 | 100197279 ~ 100197904 (-) | False | G1134050 |
| TU1291305 | lncRNA | downstream | 9105 | 100194261 ~ 100196221 (-) | False | G1134048 |
| TU1291306 | lncRNA | downstream | 9105 | 100194261 ~ 100196221 (-) | True | G1134048 |
| TU1291340 | lncRNA | upstream | 42568 | 100248302 ~ 100252231 (-) | True | G1134072 |
| TU1291341 | lncRNA | upstream | 43007 | 100248741 ~ 100252743 (-) | True | G1134073 |
| TU1291388 | lncRNA | upstream | 112902 | 100318636 ~ 100330277 (-) | True | G1134106 |
| TU1291393 | lncRNA | upstream | 120689 | 100326423 ~ 100328120 (-) | True | G1134110 |
| TU1291443 | lncRNA | upstream | 121798 | 100327532 ~ 100328040 (-) | True | G1134129 |
| XM_036939620.1 | mRNA | downstream | 219421 | 99969674 ~ 99985905 (-) | True | LOC110539073 |
| XR_005035275.1 | mRNA | downstream | 236863 | 99966423 ~ 99968463 (-) | True | LOC118937866 |
| XM_036939601.1 | mRNA | downstream | 240079 | 99946736 ~ 99965247 (-) | True | LOC110539071 |
| XR_005035282.1 | mRNA | downstream | 348070 | 99850156 ~ 99857256 (-) | False | LOC110538873 |
| XM_036939642.1 | mRNA | downstream | 532688 | 99639639 ~ 99672638 (-) | True | LOC110485298 |
| XM_036939630.1 | mRNA | upstream | 52496 | 100258230 ~ 100295591 (-) | False | LOC118937853 |
| XM_036939635.1 | mRNA | upstream | 228517 | 100434251 ~ 100462726 (-) | True | carhsp1 |
| XM_036939627.1 | mRNA | upstream | 267820 | 100473554 ~ 100499497 (-) | True | nat15 |
| XR_005035283.1 | mRNA | upstream | 284921 | 100490655 ~ 100491915 (-) | False | LOC118937869 |
| XR_005035284.1 | mRNA | upstream | 284950 | 100490684 ~ 100491915 (-) | False | LOC118937869 |
| TU1289875 | other | downstream | 280200 | 99924060 ~ 99925126 (-) | False | G1133028 |
| TU1289877 | other | downstream | 280674 | 99924060 ~ 99924652 (-) | True | G1133028 |
| TU1289697 | other | downstream | 358340 | 99840439 ~ 99846986 (-) | False | LOC110539068 |
| TU1289696 | other | downstream | 362400 | 99840439 ~ 99842926 (-) | False | LOC110539068 |
| TU1289296 | other | downstream | 878402 | 99326512 ~ 99326924 (-) | True | G1132625 |
| TU1291316 | other | upstream | 4723 | 100210457 ~ 100211148 (-) | True | G1134054 |
| TU1291344 | other | upstream | 52920 | 100258654 ~ 100295566 (-) | True | LOC118937853 |
| TU1291428 | other | upstream | 215223 | 100420957 ~ 100423066 (-) | True | G1134117 |
| TU1291514 | other | upstream | 297871 | 100503605 ~ 100504088 (-) | True | G1134183 |
| TU1291403 | other | upstream | 329116 | 100534850 ~ 100543369 (-) | False | eci1 |
