Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1291388 |
| length | 386 |
| lncRNA type | read_through |
| GC content | 0.54 |
| exon number | 4 |
| gene id | G1134106 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 100318636 ~ 100330277 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1291341 | lncRNA | downstream | 65893 | 100248741 ~ 100252743 (-) | True | G1134073 |
| TU1291340 | lncRNA | downstream | 66405 | 100248302 ~ 100252231 (-) | True | G1134072 |
| TU1291314 | lncRNA | downstream | 112902 | 100205326 ~ 100205734 (-) | True | G1134052 |
| TU1291312 | lncRNA | downstream | 120654 | 100197279 ~ 100197982 (-) | True | G1134050 |
| TU1291310 | lncRNA | downstream | 120732 | 100196958 ~ 100197904 (-) | False | G1134050 |
| TU1291447 | lncRNA | upstream | 13406 | 100343683 ~ 100345668 (-) | True | G1134133 |
| TU1291450 | lncRNA | upstream | 15481 | 100345758 ~ 100346436 (-) | True | G1134135 |
| TU1291451 | lncRNA | upstream | 17302 | 100347579 ~ 100347805 (-) | True | G1134136 |
| TU1291452 | lncRNA | upstream | 18507 | 100348784 ~ 100349294 (-) | True | G1134137 |
| TU1291457 | lncRNA | upstream | 21430 | 100351707 ~ 100353171 (-) | False | G1134138 |
| XM_036939630.1 | mRNA | downstream | 23045 | 100258230 ~ 100295591 (-) | False | LOC118937853 |
| XM_036939620.1 | mRNA | downstream | 332731 | 99969674 ~ 99985905 (-) | True | LOC110539073 |
| XR_005035275.1 | mRNA | downstream | 350173 | 99966423 ~ 99968463 (-) | True | LOC118937866 |
| XM_036939601.1 | mRNA | downstream | 353389 | 99946736 ~ 99965247 (-) | True | LOC110539071 |
| XR_005035282.1 | mRNA | downstream | 461380 | 99850156 ~ 99857256 (-) | False | LOC110538873 |
| XM_036939635.1 | mRNA | upstream | 103974 | 100434251 ~ 100462726 (-) | True | carhsp1 |
| XM_036939627.1 | mRNA | upstream | 143277 | 100473554 ~ 100499497 (-) | True | nat15 |
| XR_005035283.1 | mRNA | upstream | 160378 | 100490655 ~ 100491915 (-) | False | LOC118937869 |
| XR_005035284.1 | mRNA | upstream | 160407 | 100490684 ~ 100491915 (-) | False | LOC118937869 |
| XM_036939622.1 | mRNA | upstream | 199907 | 100530184 ~ 100543453 (-) | False | eci1 |
| TU1291344 | other | downstream | 23070 | 100258654 ~ 100295566 (-) | True | LOC118937853 |
| TU1291316 | other | downstream | 107488 | 100210457 ~ 100211148 (-) | True | G1134054 |
| TU1289875 | other | downstream | 393510 | 99924060 ~ 99925126 (-) | False | G1133028 |
| TU1289877 | other | downstream | 393984 | 99924060 ~ 99924652 (-) | True | G1133028 |
| TU1289697 | other | downstream | 471650 | 99840439 ~ 99846986 (-) | False | LOC110539068 |
| TU1291428 | other | upstream | 90680 | 100420957 ~ 100423066 (-) | True | G1134117 |
| TU1291514 | other | upstream | 173328 | 100503605 ~ 100504088 (-) | True | G1134183 |
| TU1291403 | other | upstream | 204573 | 100534850 ~ 100543369 (-) | False | eci1 |
| TU1291411 | other | upstream | 204890 | 100535167 ~ 100543369 (-) | True | eci1 |
| TU1291540 | other | upstream | 298166 | 100628443 ~ 100634457 (-) | False | LOC118937858 |
