Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1291809 |
| length | 438 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 3 |
| gene id | G1134340 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048576.1 |
| NCBI id | CM023230.2 |
| chromosome length | 102853256 |
| location | 100844601 ~ 100873181 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1291770 | lncRNA | downstream | 16509 | 100827469 ~ 100828092 (-) | True | G1134316 |
| TU1291839 | lncRNA | downstream | 20422 | 100823965 ~ 100824179 (-) | True | G1134370 |
| TU1291837 | lncRNA | downstream | 22272 | 100822097 ~ 100822329 (-) | True | G1134368 |
| TU1291636 | lncRNA | downstream | 33571 | 100808546 ~ 100811030 (-) | False | G1134268 |
| TU1291860 | lncRNA | upstream | 62216 | 100935397 ~ 100936074 (-) | False | G1134387 |
| TU1291862 | lncRNA | upstream | 62216 | 100935397 ~ 100936074 (-) | True | G1134387 |
| TU1291800 | lncRNA | upstream | 66063 | 100939244 ~ 100939972 (-) | True | G1134332 |
| TU1291762 | lncRNA | upstream | 68852 | 100942033 ~ 100942951 (-) | False | LOC110518098 |
| TU1291870 | lncRNA | upstream | 77981 | 100951162 ~ 100953715 (-) | False | G1134391 |
| XM_036939641.1 | mRNA | downstream | 9717 | 99829430 ~ 100834884 (-) | False | LOC110539068 |
| XM_036939647.1 | mRNA | downstream | 22688 | 100816544 ~ 100821913 (-) | False | LOC118937873 |
| XM_036939636.1 | mRNA | downstream | 192902 | 100628440 ~ 100651699 (-) | False | LOC118937858 |
| XR_005035286.1 | mRNA | downstream | 218875 | 100624170 ~ 100625726 (-) | False | LOC118937871 |
| XM_036939623.1 | mRNA | downstream | 285751 | 100549187 ~ 100558850 (-) | True | c12h16orf72 |
| XM_036939571.1 | mRNA | upstream | 68993 | 100942174 ~ 101130515 (-) | False | LOC110518098 |
| XM_036939640.1 | mRNA | upstream | 280363 | 101153544 ~ 101154154 (-) | False | LOC118937863 |
| XM_036939578.1 | mRNA | upstream | 282212 | 101155393 ~ 101271098 (-) | False | LOC110511505 |
| XM_036939608.1 | mRNA | upstream | 380405 | 101253586 ~ 101258211 (-) | False | LOC118937847 |
| XR_005035262.1 | mRNA | upstream | 381106 | 101254287 ~ 101255271 (-) | True | LOC118937847 |
| TU1291798 | other | downstream | 15676 | 100828518 ~ 100828925 (-) | True | LOC110539068 |
| TU1291769 | other | downstream | 16509 | 100827176 ~ 100828092 (-) | False | G1134316 |
| TU1291773 | other | downstream | 26681 | 100817272 ~ 100817920 (-) | True | LOC118937873 |
| TU1291540 | other | downstream | 210144 | 100628443 ~ 100634457 (-) | False | LOC118937858 |
| TU1291403 | other | downstream | 301232 | 100534850 ~ 100543369 (-) | False | eci1 |
| TU1291808 | other | upstream | 67224 | 100940405 ~ 100941907 (-) | True | G1134339 |
| TU1291750 | other | upstream | 75655 | 100948836 ~ 100949751 (-) | True | LOC110518098 |
| TU1291785 | other | upstream | 120629 | 100993810 ~ 100998516 (-) | False | G1134323 |
| TU1291754 | other | upstream | 202881 | 101076062 ~ 101088555 (-) | False | G1134312 |
| TU1291757 | other | upstream | 202881 | 101076062 ~ 101088555 (-) | True | G1134312 |
