RNA id: TU1292426


Basic Information

Item Value
RNA id TU1292426
length 321
lncRNA type inter_gene
GC content 0.29
exon number 2
gene id G1134789
representative True

Chromosome Information

Item Value
chromosome id NC_048576.1
NCBI id CM023230.2
chromosome length 102853256
location 102784019 ~ 102784960 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

ctaggttataatgtatagtagtgggttgttagtgatgtgtagatgttatattatgtaaagtagactaggttataatgtatagtagtgggttgttagtgatatgttatattatgtaaagtagactaggttataatgtatagtagtgggttgttagtgatgtgtagatgttatattatgtaaagtagactaggttataatgtataatagtgggttgttagtgatatgtagatgttatattatgtaaagtagactaggttataatgtatagtagtgggttgttagtgatatgtagatgttatattatgtaaagtagactaggtt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1292407 lncRNA downstream 619 102740418 ~ 102783400 (-) True G1134775
TU1292415 lncRNA downstream 14829 102757724 ~ 102769190 (-) False G1134780
TU1292410 lncRNA downstream 20479 102744358 ~ 102763540 (-) True G1134777
TU1292420 lncRNA downstream 21278 102761981 ~ 102762741 (-) True G1134783
TU1292419 lncRNA downstream 23043 102759658 ~ 102760976 (-) True G1134782
TU1292431 lncRNA upstream 22734 102807694 ~ 102809641 (-) True G1134793
XM_036939621.1 mRNA downstream 53240 102727116 ~ 102730779 (-) True LOC118937851
LOC118937849 mRNA downstream 137960 102643709 ~ 102646059 (-) True LOC118937849
XM_036936709.1 mRNA downstream 282972 102484769 ~ 102501047 (-) False LOC118937613
XM_036939615.1 mRNA downstream 339360 102436091 ~ 102444659 (-) False LOC118937850
XM_036939634.1 mRNA upstream 27641 102812601 ~ 102819699 (-) True LOC118937857
TU1292383 other downstream 156199 102626065 ~ 102627820 (-) True G1134756
TU1291704 other downstream 247689 102499273 ~ 102536330 (-) False LOC118937613
TU1291705 other downstream 247689 102534747 ~ 102536330 (-) True LOC118937613
TU1291706 other downstream 282987 102499273 ~ 102501032 (-) False LOC118937613
TU1292305 other downstream 394667 102388776 ~ 102389352 (-) True G1134697

Expression Profile