Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1299841 |
| length | 1094 |
| lncRNA type | sense_over |
| GC content | 0.42 |
| exon number | 2 |
| gene id | LOC110494877 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 6842471 ~ 6853303 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1299844 | lncRNA | downstream | 241 | 6843574 ~ 6843883 (-) | False | LOC110494877 |
| TU1299831 | lncRNA | downstream | 8331 | 6835508 ~ 6835793 (-) | True | G1140161 |
| TU1299823 | lncRNA | downstream | 29361 | 6806719 ~ 6814763 (-) | False | G1140154 |
| TU1299824 | lncRNA | downstream | 31545 | 6806719 ~ 6812579 (-) | True | G1140154 |
| TU1299820 | lncRNA | downstream | 42028 | 6801624 ~ 6802096 (-) | True | G1140151 |
| TU1299850 | lncRNA | upstream | 9828 | 6855089 ~ 6855312 (-) | True | G1140174 |
| TU1299863 | lncRNA | upstream | 40259 | 6885520 ~ 6885721 (-) | True | G1140187 |
| TU1299873 | lncRNA | upstream | 57846 | 6903107 ~ 6903366 (-) | True | G1140196 |
| TU1299874 | lncRNA | upstream | 58110 | 6903371 ~ 6903665 (-) | True | G1140197 |
| TU1299877 | lncRNA | upstream | 65172 | 6910433 ~ 6910645 (-) | True | G1140200 |
| XM_036940054.1 | mRNA | downstream | 12310 | 6780006 ~ 6831814 (-) | False | LOC110510388 |
| XM_036940055.1 | mRNA | downstream | 12310 | 6780006 ~ 6831814 (-) | False | LOC110510388 |
| XM_036940050.1 | mRNA | downstream | 127022 | 6701003 ~ 6717102 (-) | False | LOC118938170 |
| XM_036940049.1 | mRNA | downstream | 127023 | 6698319 ~ 6717101 (-) | False | LOC118938170 |
| XM_036940048.1 | mRNA | downstream | 165554 | 6655544 ~ 6678570 (-) | True | LOC110511140 |
| XR_005035428.1 | mRNA | upstream | 27284 | 6872545 ~ 6874113 (-) | True | LOC118938173 |
| XM_036940064.1 | mRNA | upstream | 133878 | 6979139 ~ 7000354 (-) | False | LOC110513509 |
| XM_036940080.1 | mRNA | upstream | 439455 | 7284716 ~ 7290833 (-) | True | LOC110485501 |
| XM_036940079.1 | mRNA | upstream | 471053 | 7316314 ~ 7403758 (-) | True | LOC110519431 |
| XR_005035433.1 | mRNA | upstream | 495815 | 7341076 ~ 7341680 (-) | True | LOC118938181 |
| TU1299636 | other | downstream | 61987 | 6779248 ~ 6782137 (-) | True | LOC110510388 |
| TU1299773 | other | downstream | 135146 | 6698382 ~ 6708978 (-) | False | LOC118938170 |
| TU1299690 | other | downstream | 194997 | 6629001 ~ 6649127 (-) | True | LOC110485426 |
| TU1299693 | other | downstream | 215304 | 6624152 ~ 6628820 (-) | False | LOC110485426 |
| TU1299683 | other | downstream | 227128 | 6606319 ~ 6616996 (-) | False | LOC110485426 |
| TU1299840 | other | upstream | 149 | 6845410 ~ 6852671 (-) | True | LOC110494877 |
| TU1299886 | other | upstream | 74468 | 6919729 ~ 6952206 (-) | True | G1140208 |
| TU1299907 | other | upstream | 82441 | 6927702 ~ 7076651 (-) | False | LOC110513509 |
| TU1299928 | other | upstream | 88771 | 6934032 ~ 7080027 (-) | False | LOC110513509 |
| TU1299913 | other | upstream | 89329 | 6934590 ~ 7081455 (-) | False | LOC110513509 |
