Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1302904 |
| length | 1187 |
| lncRNA type | sense_over |
| GC content | 0.40 |
| exon number | 1 |
| gene id | LOC110487189 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 10740805 ~ 10762367 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0048193 | Golgi vesicle transport | biological_process |
| GO:0016020 | membrane | cellular_component |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1302910 | lncRNA | downstream | 743 | 10739502 ~ 10740062 (-) | True | G1142500 |
| TU1302912 | lncRNA | downstream | 2535 | 10733912 ~ 10738270 (-) | True | G1142502 |
| TU1302920 | lncRNA | downstream | 7251 | 10733105 ~ 10733554 (-) | True | G1142510 |
| TU1302923 | lncRNA | downstream | 8288 | 10732106 ~ 10732517 (-) | True | G1142513 |
| TU1303269 | lncRNA | downstream | 24044 | 10715842 ~ 10716761 (-) | True | G1142804 |
| TU1302925 | lncRNA | upstream | 72032 | 10814023 ~ 10843369 (-) | True | G1142515 |
| TU1302945 | lncRNA | upstream | 83619 | 10825610 ~ 10829252 (-) | True | G1142535 |
| TU1303303 | lncRNA | upstream | 136007 | 10877998 ~ 10878203 (-) | True | G1142838 |
| TU1303304 | lncRNA | upstream | 136853 | 10878844 ~ 10879108 (-) | True | G1142839 |
| TU1303322 | lncRNA | upstream | 156696 | 10898687 ~ 10899346 (-) | True | G1142849 |
| XM_036942320.1 | mRNA | downstream | 23438 | 10697026 ~ 10717367 (-) | False | LOC110485344 |
| XM_036942322.1 | mRNA | downstream | 23438 | 10702791 ~ 10717367 (-) | True | LOC110485344 |
| XM_036942321.1 | mRNA | downstream | 28442 | 10697026 ~ 10712363 (-) | False | LOC110485344 |
| XM_036942342.1 | mRNA | downstream | 83473 | 10634149 ~ 10657332 (-) | False | LOC110487259 |
| XM_036942304.1 | mRNA | downstream | 418622 | 10313723 ~ 10322183 (-) | True | LOC110516362 |
| XM_036942587.1 | mRNA | upstream | 38350 | 10780341 ~ 10913542 (-) | False | LOC110494931 |
| XM_036942357.1 | mRNA | upstream | 239691 | 10981682 ~ 11101213 (-) | True | LOC118938429 |
| XM_036942360.1 | mRNA | upstream | 365555 | 11107546 ~ 11110630 (-) | True | LOC118938431 |
| XM_036942359.1 | mRNA | upstream | 373144 | 11115135 ~ 11116092 (-) | True | LOC110485570 |
| XR_005035707.1 | mRNA | upstream | 490494 | 11232485 ~ 11233755 (-) | False | LOC118938432 |
| TU1303216 | other | downstream | 174340 | 10564460 ~ 10566465 (-) | True | G1142757 |
| TU1303056 | other | downstream | 441438 | 10295744 ~ 10299367 (-) | False | G1142620 |
| TU1302900 | other | downstream | 638287 | 10097922 ~ 10102518 (-) | True | lgals2b |
| TU1302452 | other | downstream | 758539 | 9980348 ~ 9982266 (-) | True | G1142121 |
| TU1302244 | other | downstream | 1071623 | 9667245 ~ 9669182 (-) | True | G1141973 |
| TU1302932 | other | upstream | 78433 | 10820424 ~ 10822367 (-) | True | LOC110494931 |
| TU1303981 | other | upstream | 415895 | 11157886 ~ 11159261 (-) | True | G1143380 |
| TU1304064 | other | upstream | 539071 | 11281062 ~ 11282092 (-) | True | G1143449 |
| TU1304123 | other | upstream | 685699 | 11427690 ~ 11429365 (-) | True | LOC110485554 |
| TU1304109 | other | upstream | 713583 | 11455574 ~ 11494340 (-) | True | LOC118938427 |
