RNA id: XM_036939718.1


Basic Information

Item Value
RNA id XM_036939718.1
length 2582
RNA type mRNA
GC content 0.48
exon number 10
gene id il2rb2
representative False

Chromosome Information

Item Value
chromosome id NC_048577.1
NCBI id CM023231.2
chromosome length 73332040
location 31701964 ~ 31709740 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome
species rainbow trout
(Oncorhynchus mykiss)

Sequence

CCTTAGCGAGAGGTTGTGGTTACGTGTGTCACCATGAAATGTCATTGGGCACTTCAatcgagagggagggagagagagagtaagagagcgaTAGCGTTAAGGAGCAGGAGAgaatgatagagacagaaagtcAGAGTGAGAGAGCGctagaggcacagagagagacagtcacaaagggagagacagacagacagagacctgaggctaaggagacagagaggagagagcatcTGCACAAGTCAAATAGTCAAAACAGAACAAAGAAAGTACGAGAACAGAATGAGGACTGTGCTGACACGTCGACCCTGACTAAGAGGACAGGGGCGGTAATGATGTGGTCCATGCTTCACCTGCTGTTCCTGCTGTCTGTCCCACCAGGCTTCACTCACAACCTCCAAGGACTGTTTTGTGTGAATGACTACATCAACAACATCGCCTGTGTGTGGAACAGCTCGGGAATAGATCCAGATGTGGCCTGCCAGCTCCTCGGTACAAGAGAAGACTATGAAAACAATTTTTTCCAGAGTGGTTGTGATCTCAAACCCTTGGAAGGTCATTCTTTTGGAGGCTGCAGTTTTGTCTTTAAGGGCCATTATTTCAGTTCAAACGAGAACCTCCCCAGCATTAAGGTGGAGTGTAACGGGTCTGAGGCGGCAAACCTCATAAAATACACACCTATCGAACACATTAAGATGCATCCTCCTGGTATCCCGCTCATCATCAATGGGACAAATGCCACCTGGACTGCTGGTAGTCCGCTGTCTAAGAAGATCTTTGCATATGAGTTCCAGGTGAAGGTGAAGAGGGAAGGCCAGCTATGGGGGgagGCCAAGAATTTTACCAGACCAAAGCAGGAACCGTGGATGGAGCTGGGTGTGGAGGAGAGTGGGATTCATCACATCAGGGTGAGAGTCAAGCCGACCCAGCCCGCCTCTAGCCACTGGAGTGAGTGGAGCCCCACTGCATCCTGGACATCAGAGGACAAGGTCTCACCAACCTTTGTGCAATCCCCGGACCTGGCTTTGTGGCTGGTGTTGAGTGGTGCGCTTTTCACTCTCATCATTGTCATGTTGCTAGTCTTCTACAAAACACATATTAACAATAGGAAACACCAGTATGTGCCTGACCCCGCCAAGTACTTCCAGCCACTTAACTCTGTCCACGGTGGAAACTTTCAGAAATGGCTGAGCCCCTTGTTTGCTCCAGAGTGCTTCATCACCGCCCAGCCCGGCGAGGACATCTCCCCTGTGGAGGTGTCTGGAACAGAAGTCTGGGACGTCACCGACTCCACCAGCTGCACCACCACAGCCTTCCTCCTACACTCTGACCCCAACACCCCCTCTGATGGCTGGAACAGCAGCGGCCAGTCCTCCTGCTTCTCCAACATCGGCTACTTCTACCCCAGCGGCTTCCGCATCGAGTCTTGTCCCGTCTACTTCACCTACCAGGGGGACCACAGCTCTCTCTACgccacctccacatcctcctcctatGAGCTCTTGGAACTTCTCGGTGGGCTGCAGAGGGAGCCCCAGAGCCCAGACTCTGGTTTCGGCATGGAGAGCGTAGAGGGGAAGGAccaggtggaggaggaaggaaaGGGTCAGAAGGAAAGGGATGTGGCTCCAGTTGACCATCATTCACCCCCTCCTCTTGTCCTACCAGTCCCCCTGCCTGCTGGGATCCCTCCAGGCCCTCACCATCCCCCGAGTCTCCCTCAACTCCCCCTTCATAATCCTGAGACTAACTCTGCCATGGCGCCTAGCAGCAGTTACAATGCCTGGCCAGTAGAGGCTGCTCTAGGCAGATCCTCCTCGATGACAGTGGAACCCATTTGTAGCGGCTATTTGACCATTAATGAGCTGCAGAATACCTACAGCAACAAGTCTATTTGAACAATCAATTTTTCACTCAATTTACATTTTAGTTGAGCTGTTGAACTTATTCTTCGTGCAAACTATGACACAAGGCTCAGATAATGCAGGAACAAAATCATTTTTTGCATGGTATTTTACATGATAAAATACCATttagtttatttgtattttatatacATTTTGTATATTACTTGTATTACTATTGAGGCAGCTGGTTTGCCAATGCGTTGTTACTTTATCTCAGATAGTTAGTGCTGCTAGTTGTTTTTGTCTTTAAATGCGTTCACTGACATCTTGCTTGTATGAAGACCTGAATAAAACCTCTGGCAGAAGAGAAGTGGGTCAGCCTTTAACTTCTTATGTTTGTGGGCTTAGGTAGTCTGCCCTACagtaccaagcaaaaaggcagtaactgctaaTTTGGTCGAAAATGAGTTAGTCGTTTTTGCTACAataaatacatgcttaatcatgtggacaagtatccttcCTCTAATGTATTGTGTTTTTgagaaaatgggggtcatgttagcaTTAACTAcataaagttactgtgaaaccaaggtaaataaaagccatttttctcagttccacTCTGAGCAGTTACTGcttttttgcttggtagggcagttaAAGTGGCAAAGAGTGGACAAGTGttcctgctgtgtgtgtatgtgtgttggtgtgtttgcgtgcgtgtatCAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU1328174 lncRNA upstream 47261 31654315 ~ 31654703 (+) True G1164618
TU1328168 lncRNA upstream 66105 31635518 ~ 31635859 (+) True G1164612
TU1328160 lncRNA upstream 78693 31622998 ~ 31623271 (+) True G1164604
TU1328144 lncRNA upstream 108670 31592211 ~ 31593294 (+) True G1164591
TU1328136 lncRNA upstream 117456 31583458 ~ 31584508 (+) True G1164583
TU1328179 lncRNA downstream 7768 31717508 ~ 31807548 (+) True G1164620
TU1328176 lncRNA downstream 8863 31718603 ~ 31810999 (+) True G1164619
TU1328181 lncRNA downstream 32986 31742726 ~ 31747322 (+) True G1164622
TU1328585 lncRNA downstream 209008 31918748 ~ 31919040 (+) True G1164993
TU1328818 lncRNA downstream 444211 32153951 ~ 32154176 (+) True G1165223
XR_002468281.2 mRNA upstream 9696 31691533 ~ 31692268 (+) True LOC110487528
XM_021557502.2 mRNA upstream 11759 31684474 ~ 31690205 (+) True LOC110486131
XM_021557500.2 mRNA upstream 28074 31666240 ~ 31673890 (+) True LOC110486130
XM_021557499.2 mRNA upstream 52123 31642382 ~ 31649841 (+) True LOC110486128
XM_021557492.2 mRNA upstream 190235 31489817 ~ 31511729 (+) False LOC110486123
XM_036940770.1 mRNA downstream 292001 32001741 ~ 32159164 (+) False LOC110486134
XM_036940771.1 mRNA downstream 558476 32268216 ~ 32289324 (+) False LOC110486136
XM_036940772.1 mRNA downstream 558477 32268217 ~ 32289324 (+) True LOC110486136
XM_036940773.1 mRNA downstream 580601 32290341 ~ 32370648 (+) False LOC110486139
XM_036940775.1 mRNA downstream 580601 32290341 ~ 32370648 (+) False LOC110486139
TU1327390 other upstream 582287 31114311 ~ 31119677 (+) True LOC110486104
TU1326020 other upstream 1870668 29830754 ~ 29831296 (+) True G1162753
TU1325585 other upstream 2207062 29494362 ~ 29494902 (+) True G1162364
TU1325047 other upstream 2331017 29364052 ~ 29370947 (+) True si:ch211-126j24.1
TU1325076 other upstream 2402308 29298758 ~ 29299656 (+) True G1161908
TU1328699 other downstream 292011 32001751 ~ 32110733 (+) False LOC110486134
TU1329495 other downstream 1005516 32715256 ~ 32722462 (+) True ifn2
TU1329888 other downstream 1519373 33229113 ~ 33230483 (+) True LOC110486146
TU1330025 other downstream 1530213 33239953 ~ 33249208 (+) False G1166318
TU1330567 other downstream 2080900 33790640 ~ 33803665 (+) True G1166779

Expression Profile