Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1341863 |
| length | 708 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 1 |
| gene id | LOC110486410 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 42395802 ~ 42424908 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1341904 | lncRNA | downstream | 7065 | 42416887 ~ 42417114 (-) | True | G1176714 |
| TU1341870 | lncRNA | downstream | 28485 | 42394786 ~ 42395694 (-) | True | G1176693 |
| TU1341861 | lncRNA | downstream | 61848 | 42362093 ~ 42362331 (-) | True | G1176687 |
| TU1341851 | lncRNA | downstream | 69656 | 42354324 ~ 42354523 (-) | True | G1176678 |
| TU1341233 | lncRNA | downstream | 86585 | 42337356 ~ 42337594 (-) | True | G1176170 |
| TU1341908 | lncRNA | upstream | 19029 | 42443915 ~ 42444224 (-) | True | G1176718 |
| TU1341915 | lncRNA | upstream | 33628 | 42458514 ~ 42489788 (-) | True | G1176723 |
| TU1341945 | lncRNA | upstream | 66453 | 42491339 ~ 42491598 (-) | True | G1176750 |
| TU1341946 | lncRNA | upstream | 67530 | 42492416 ~ 42492745 (-) | True | G1176751 |
| TU1341949 | lncRNA | upstream | 71511 | 42496397 ~ 42496837 (-) | True | G1176754 |
| XR_005035740.1 | mRNA | downstream | 66934 | 42350528 ~ 42357245 (-) | True | LOC118938459 |
| XM_021557985.2 | mRNA | downstream | 132202 | 42210222 ~ 42291977 (-) | False | LOC110486406 |
| XM_021557986.2 | mRNA | downstream | 132202 | 42210222 ~ 42291977 (-) | True | LOC110486406 |
| XM_021557965.2 | mRNA | downstream | 408273 | 42008614 ~ 42015906 (-) | True | LOC110486400 |
| XM_021557963.2 | mRNA | downstream | 408275 | 42007646 ~ 42015904 (-) | False | LOC110486400 |
| XM_021557999.2 | mRNA | upstream | 1490 | 42426376 ~ 42435161 (-) | False | LOC110486411 |
| XM_036942453.1 | mRNA | upstream | 1490 | 42426376 ~ 42435161 (-) | True | LOC110486411 |
| XM_021558006.2 | mRNA | upstream | 28208 | 42453094 ~ 42456995 (-) | False | LOC110486413 |
| XM_021559456.2 | mRNA | upstream | 44370 | 42469256 ~ 42477048 (-) | False | LOC110487542 |
| XM_036942448.1 | mRNA | upstream | 44370 | 42469256 ~ 42477053 (-) | False | LOC110487542 |
| TU1341227 | other | downstream | 95607 | 42328044 ~ 42328572 (-) | True | G1176164 |
| TU1340947 | other | downstream | 424088 | 41999352 ~ 42000091 (-) | True | G1175906 |
| TU1340945 | other | downstream | 426542 | 41997314 ~ 41997637 (-) | True | G1175904 |
| TU1340025 | other | downstream | 1132385 | 41290349 ~ 41291794 (-) | True | col5a3a |
| TU1340027 | other | downstream | 1134390 | 41284782 ~ 41289789 (-) | False | col5a3a |
| TU1341849 | other | upstream | 28273 | 42453159 ~ 42456946 (-) | True | LOC110486413 |
| TU1341929 | other | upstream | 44816 | 42469702 ~ 42471978 (-) | True | LOC110487542 |
| TU1341944 | other | upstream | 65672 | 42490558 ~ 42491172 (-) | True | G1176749 |
| TU1342090 | other | upstream | 377558 | 42802444 ~ 42809080 (-) | True | LOC110486438 |
| TU1342252 | other | upstream | 579870 | 43004756 ~ 43007324 (-) | True | G1177025 |
