Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_021558267.2 |
| length | 1263 |
| RNA type | mRNA |
| GC content | 0.51 |
| exon number | 6 |
| gene id | LOC100136054 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 46179912 ~ 46183380 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0097159 | organic cyclic compound binding | molecular_function |
| GO:1901363 | heterocyclic compound binding | molecular_function |
| id | description |
|---|---|
| K12881 | THOC4, ALY; THO complex subunit 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1345668 | lncRNA | upstream | 44388 | 46135107 ~ 46135524 (+) | True | LOC110486562 |
| TU1345656 | lncRNA | upstream | 62315 | 46117131 ~ 46117597 (+) | True | G1179970 |
| TU1345639 | lncRNA | upstream | 94154 | 46081320 ~ 46085758 (+) | True | G1179953 |
| TU1345638 | lncRNA | upstream | 99072 | 46080285 ~ 46080840 (+) | True | G1179952 |
| TU1345559 | lncRNA | upstream | 204756 | 45974212 ~ 45975156 (+) | True | G1179880 |
| TU1345704 | lncRNA | downstream | 17120 | 46200500 ~ 46202304 (+) | True | G1180010 |
| TU1345703 | lncRNA | downstream | 37223 | 46220603 ~ 46226688 (+) | True | LOC110486572 |
| TU1345701 | lncRNA | downstream | 47005 | 46230385 ~ 46235061 (+) | True | G1180008 |
| TU1345756 | lncRNA | downstream | 84150 | 46267530 ~ 46267925 (+) | True | G1180058 |
| TU1345768 | lncRNA | downstream | 113400 | 46296780 ~ 46297068 (+) | True | G1180070 |
| XM_036941279.1 | mRNA | upstream | 3354 | 46173911 ~ 46176558 (+) | False | LOC118936304 |
| XM_036941281.1 | mRNA | upstream | 3354 | 46173932 ~ 46176558 (+) | False | LOC118936304 |
| XM_036941280.1 | mRNA | upstream | 3354 | 46174071 ~ 46176558 (+) | False | LOC118936304 |
| XM_021558262.2 | mRNA | upstream | 12620 | 46164994 ~ 46167292 (+) | True | LOC110486563 |
| LOC110486562 | mRNA | upstream | 40947 | 46130578 ~ 46138965 (+) | False | LOC110486562 |
| XM_021558273.2 | mRNA | downstream | 1026 | 46184406 ~ 46200116 (+) | False | LOC110486565 |
| XM_036941282.1 | mRNA | downstream | 1026 | 46184406 ~ 46200116 (+) | False | LOC110486565 |
| XM_021558272.2 | mRNA | downstream | 1030 | 46184410 ~ 46200116 (+) | False | LOC110486565 |
| XM_021558274.2 | mRNA | downstream | 1030 | 46184410 ~ 46200116 (+) | True | LOC110486565 |
| XR_002468089.2 | mRNA | downstream | 36499 | 46219879 ~ 46225757 (+) | False | LOC110486572 |
| TU1345697 | other | upstream | 3350 | 46174028 ~ 46176562 (+) | False | LOC118936304 |
| TU1345699 | other | upstream | 3350 | 46174482 ~ 46176562 (+) | True | LOC118936304 |
| TU1345036 | other | upstream | 649784 | 45529436 ~ 45530128 (+) | True | LOC110485192 |
| TU1344997 | other | upstream | 716969 | 45462588 ~ 45462943 (+) | True | G1179362 |
| TU1344763 | other | upstream | 866879 | 45312330 ~ 45313033 (+) | True | G1179156 |
| TU1345745 | other | downstream | 55764 | 46239144 ~ 46273601 (+) | True | G1180047 |
| TU1345717 | other | downstream | 148338 | 46331718 ~ 46336278 (+) | True | LOC110485193 |
| TU1347316 | other | downstream | 1190783 | 47374163 ~ 47374477 (+) | True | G1181472 |
| TU1347462 | other | downstream | 1284736 | 47468116 ~ 47470012 (+) | False | tmem100a |
| TU1347459 | other | downstream | 1284821 | 47468201 ~ 47470012 (+) | True | tmem100a |
