Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1351847 |
| length | 325 |
| RNA type | TUCP |
| GC content | 0.57 |
| exon number | 2 |
| gene id | LOC110487554 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 51384172 ~ 51394113 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0007186 | G protein-coupled receptor signaling pathway | biological_process |
| GO:0016020 | membrane | cellular_component |
| GO:0004958 | prostaglandin F receptor activity | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1351824 | lncRNA | upstream | 24449 | 51352242 ~ 51359723 (+) | True | LOC110486735 |
| TU1351796 | lncRNA | upstream | 70187 | 51313766 ~ 51313985 (+) | True | G1185366 |
| TU1351777 | lncRNA | upstream | 93922 | 51289810 ~ 51290250 (+) | True | G1185347 |
| TU1351773 | lncRNA | upstream | 97938 | 51285958 ~ 51286234 (+) | True | G1185343 |
| TU1351772 | lncRNA | upstream | 98323 | 51285630 ~ 51285849 (+) | True | G1185342 |
| TU1351875 | lncRNA | downstream | 50835 | 51442917 ~ 51471830 (+) | True | G1185435 |
| TU1351891 | lncRNA | downstream | 73261 | 51465343 ~ 51468001 (+) | True | G1185451 |
| TU1351897 | lncRNA | downstream | 84253 | 51476335 ~ 51481810 (+) | True | G1185457 |
| TU1351904 | lncRNA | downstream | 92977 | 51485059 ~ 51486576 (+) | True | G1185464 |
| TU1351906 | lncRNA | downstream | 97387 | 51489469 ~ 51489672 (+) | True | G1185466 |
| XM_036941440.1 | mRNA | upstream | 10181 | 51344378 ~ 51373991 (+) | False | LOC110486735 |
| XM_021558558.2 | mRNA | upstream | 10181 | 51352198 ~ 51373991 (+) | False | LOC110486735 |
| XR_002468101.2 | mRNA | upstream | 391330 | 50991494 ~ 50992842 (+) | True | LOC110486733 |
| XM_036941432.1 | mRNA | upstream | 418955 | 50939574 ~ 50965217 (+) | True | LOC110485209 |
| XM_021558543.2 | mRNA | upstream | 489693 | 50885729 ~ 50894479 (+) | True | LOC110486729 |
| XM_036941443.1 | mRNA | downstream | 2354 | 51394436 ~ 51402528 (+) | False | LOC110486737 |
| XM_036941441.1 | mRNA | downstream | 2356 | 51394438 ~ 51404580 (+) | False | LOC110486737 |
| XM_036941442.1 | mRNA | downstream | 2358 | 51394440 ~ 51404580 (+) | True | LOC110486737 |
| XM_021558573.2 | mRNA | downstream | 170282 | 51562364 ~ 51566331 (+) | True | LOC110486745 |
| XM_021558577.2 | mRNA | downstream | 194164 | 51586246 ~ 51590496 (+) | True | LOC110486751 |
| TU1350772 | other | upstream | 397606 | 50985813 ~ 50986566 (+) | True | G1184435 |
| TU1350149 | other | upstream | 1500737 | 49882821 ~ 49883435 (+) | True | G1183875 |
| TU1350070 | other | upstream | 1549158 | 49832221 ~ 49835014 (+) | True | G1183819 |
| TU1348832 | other | upstream | 1799610 | 49580326 ~ 49584562 (+) | True | ndua4 |
| TU1348815 | other | upstream | 1957949 | 49419570 ~ 49426223 (+) | False | G1182742 |
| TU1351876 | other | downstream | 53825 | 51445907 ~ 51446557 (+) | True | G1185436 |
| TU1351980 | other | downstream | 235600 | 51627682 ~ 51628676 (+) | True | G1185521 |
| TU1351986 | other | downstream | 259531 | 51651613 ~ 51653770 (+) | True | G1185527 |
| TU1351981 | other | downstream | 301801 | 51693883 ~ 51695058 (+) | True | G1185522 |
| TU1351994 | other | downstream | 305794 | 51697876 ~ 51698646 (+) | True | G1185535 |
