Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_036939766.1 |
| length | 702 |
| RNA type | mRNA |
| GC content | 0.46 |
| exon number | 2 |
| gene id | LOC110515633 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 53658770 ~ 53662221 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | name | namespace |
|---|---|---|
| GO:0042254 | ribosome biogenesis | biological_process |
| GO:0005730 | nucleolus | cellular_component |
| GO:0003723 | RNA binding | molecular_function |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1354009 | lncRNA | upstream | 5157 | 53641900 ~ 53653613 (+) | True | G1187245 |
| TU1353936 | lncRNA | upstream | 215950 | 53442564 ~ 53442820 (+) | True | G1187192 |
| TU1353912 | lncRNA | upstream | 230730 | 53427418 ~ 53428040 (+) | True | G1187173 |
| TU1353906 | lncRNA | upstream | 237728 | 53420774 ~ 53421042 (+) | True | G1187167 |
| TU1353901 | lncRNA | upstream | 245669 | 53411591 ~ 53413101 (+) | True | G1187163 |
| TU1354017 | lncRNA | downstream | 6195 | 53668416 ~ 53669862 (+) | True | G1187253 |
| TU1354024 | lncRNA | downstream | 14288 | 53676509 ~ 53766636 (+) | False | G1187259 |
| TU1354025 | lncRNA | downstream | 14288 | 53676509 ~ 53766212 (+) | True | G1187259 |
| TU1354008 | lncRNA | downstream | 50903 | 53713124 ~ 53716000 (+) | True | G1187244 |
| TU1354037 | lncRNA | downstream | 54085 | 53716306 ~ 53720111 (+) | True | G1187271 |
| XR_005035599.1 | mRNA | upstream | 24605 | 53626034 ~ 53634165 (+) | False | LOC110538749 |
| XM_021625714.2 | mRNA | upstream | 24605 | 53630479 ~ 53634165 (+) | True | LOC110538749 |
| trnal-uag-2 | mRNA | upstream | 113206 | 53545483 ~ 53545564 (+) | True | trnal-uag-2 |
| XM_036941489.1 | mRNA | upstream | 180486 | 53464210 ~ 53478284 (+) | True | cdr2a |
| XM_036941491.1 | mRNA | upstream | 200149 | 53456336 ~ 53458621 (+) | False | LOC110538736 |
| XM_021558611.2 | mRNA | downstream | 28239 | 53690460 ~ 53694370 (+) | True | LOC110486792 |
| XM_036941510.1 | mRNA | downstream | 45102 | 53707323 ~ 53712693 (+) | False | LOC110486793 |
| XM_036941509.1 | mRNA | downstream | 45591 | 53707812 ~ 53712693 (+) | False | LOC110486793 |
| XM_036941507.1 | mRNA | downstream | 45965 | 53708186 ~ 53712693 (+) | False | LOC110486793 |
| XM_036941511.1 | mRNA | downstream | 45965 | 53708186 ~ 53712693 (+) | True | LOC110486793 |
| TU1353929 | other | upstream | 208306 | 53446423 ~ 53450464 (+) | False | LOC110538743 |
| TU1353930 | other | upstream | 209054 | 53446423 ~ 53449716 (+) | True | LOC110538743 |
| TU1353565 | other | upstream | 635789 | 53004052 ~ 53022981 (+) | True | LOC110539012 |
| TU1352390 | other | upstream | 1269574 | 52378870 ~ 52389196 (+) | True | LOC110486767 |
| TU1352351 | other | upstream | 1302829 | 52274330 ~ 52355941 (+) | True | G1185855 |
| TU1354243 | other | downstream | 526346 | 54188567 ~ 54198015 (+) | False | G1187452 |
| TU1354245 | other | downstream | 526346 | 54188567 ~ 54194138 (+) | False | G1187452 |
| TU1354170 | other | downstream | 601845 | 54264066 ~ 54265028 (+) | True | G1187390 |
| TU1354165 | other | downstream | 629364 | 54291585 ~ 54300313 (+) | True | axin2 |
| TU1355296 | other | downstream | 1331453 | 54993674 ~ 54997295 (+) | False | G1188344 |
