Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1354438 |
| length | 683 |
| lncRNA type | sense_over |
| GC content | 0.55 |
| exon number | 3 |
| gene id | LOC110485227 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 54755882 ~ 54810128 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1354459 | lncRNA | upstream | 23243 | 54780633 ~ 54780952 (+) | True | G1187626 |
| TU1354450 | lncRNA | upstream | 37038 | 54766482 ~ 54767157 (+) | True | G1187618 |
| TU1354443 | lncRNA | upstream | 41277 | 54762116 ~ 54762918 (+) | True | G1187614 |
| TU1354426 | lncRNA | upstream | 61747 | 54739219 ~ 54742448 (+) | True | G1187601 |
| TU1354423 | lncRNA | upstream | 68820 | 54735047 ~ 54735375 (+) | True | G1187598 |
| TU1354433 | lncRNA | downstream | 75 | 54808538 ~ 54809493 (+) | True | LOC110485227 |
| TU1354474 | lncRNA | downstream | 17952 | 54826415 ~ 54826958 (+) | True | G1187638 |
| TU1354483 | lncRNA | downstream | 25535 | 54833998 ~ 54835383 (+) | True | G1187645 |
| TU1355278 | lncRNA | downstream | 171156 | 54979619 ~ 54979889 (+) | True | G1188328 |
| TU1355281 | lncRNA | downstream | 173769 | 54982232 ~ 54982474 (+) | True | G1188331 |
| XM_036941547.1 | mRNA | upstream | 2274 | 54755887 ~ 54801921 (+) | False | LOC110485227 |
| XM_036941539.1 | mRNA | upstream | 72830 | 54720661 ~ 54731365 (+) | True | LOC110486811 |
| XM_036941538.1 | mRNA | upstream | 83893 | 54717610 ~ 54720302 (+) | True | LOC110486816 |
| XM_036941537.1 | mRNA | upstream | 93638 | 54701105 ~ 54710557 (+) | True | LOC110486813 |
| XM_036939767.1 | mRNA | upstream | 148332 | 54655147 ~ 54655863 (+) | True | LOC118938094 |
| XM_036941556.1 | mRNA | downstream | 99105 | 54907568 ~ 54925441 (+) | True | LOC110486830 |
| XM_036941557.1 | mRNA | downstream | 117104 | 54925567 ~ 54933422 (+) | False | narfl |
| XM_036941558.1 | mRNA | downstream | 117104 | 54925567 ~ 54933422 (+) | True | narfl |
| XM_021558671.2 | mRNA | downstream | 130557 | 54939020 ~ 54940491 (+) | True | LOC110486846 |
| XM_036941571.1 | mRNA | downstream | 532239 | 55340702 ~ 55394765 (+) | False | LOC110539040 |
| TU1354165 | other | upstream | 503882 | 54291585 ~ 54300313 (+) | True | axin2 |
| TU1354170 | other | upstream | 539167 | 54264066 ~ 54265028 (+) | True | G1187390 |
| TU1354243 | other | upstream | 606180 | 54188567 ~ 54198015 (+) | False | G1187452 |
| TU1354245 | other | upstream | 610057 | 54188567 ~ 54194138 (+) | False | G1187452 |
| TU1353930 | other | upstream | 1354479 | 53446423 ~ 53449716 (+) | True | LOC110538743 |
| TU1355296 | other | downstream | 185211 | 54993674 ~ 54997295 (+) | False | G1188344 |
| TU1355297 | other | downstream | 185211 | 54993674 ~ 54997295 (+) | False | G1188344 |
| TU1355298 | other | downstream | 185211 | 54993674 ~ 54997295 (+) | True | G1188344 |
| TU1355362 | other | downstream | 312798 | 55121261 ~ 55122619 (+) | True | G1188386 |
| TU1355596 | other | downstream | 532261 | 55340724 ~ 55366316 (+) | True | LOC110539040 |
