Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1299643 |
| length | 230 |
| lncRNA type | inter_gene |
| GC content | 0.39 |
| exon number | 1 |
| gene id | G1140000 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 6323527 ~ 6323756 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1299627 | lncRNA | downstream | 6511 | 6316671 ~ 6317016 (-) | True | G1139994 |
| TU1299613 | lncRNA | downstream | 21111 | 6288571 ~ 6302416 (-) | True | G1139981 |
| TU1299315 | lncRNA | downstream | 88704 | 6151587 ~ 6234823 (-) | True | G1139747 |
| TU1299510 | lncRNA | downstream | 192319 | 6129030 ~ 6131208 (-) | True | G1139898 |
| TU1299533 | lncRNA | downstream | 238422 | 6083484 ~ 6085105 (-) | True | G1139913 |
| TU1299666 | lncRNA | upstream | 52059 | 6375815 ~ 6376564 (-) | True | G1140021 |
| TU1299669 | lncRNA | upstream | 59888 | 6383644 ~ 6383868 (-) | True | G1140024 |
| TU1299670 | lncRNA | upstream | 60172 | 6383928 ~ 6384550 (-) | True | G1140025 |
| TU1299672 | lncRNA | upstream | 62799 | 6386555 ~ 6388686 (-) | True | G1140026 |
| TU1299712 | lncRNA | upstream | 91148 | 6414904 ~ 6416279 (-) | True | G1140057 |
| XM_036939982.1 | mRNA | downstream | 17120 | 6248910 ~ 6306407 (-) | False | LOC110519908 |
| XM_036939983.1 | mRNA | downstream | 17120 | 6248910 ~ 6306407 (-) | True | LOC110519908 |
| XM_036939984.1 | mRNA | downstream | 44039 | 6248910 ~ 6279488 (-) | False | LOC110519908 |
| XM_036939958.1 | mRNA | downstream | 78914 | 6203971 ~ 6244613 (-) | False | LOC118938166 |
| XM_036940004.1 | mRNA | upstream | 105366 | 6429122 ~ 6450055 (-) | True | LOC110485390 |
| XM_036940009.1 | mRNA | upstream | 146717 | 6470473 ~ 6500574 (-) | False | LOC110487211 |
| XM_036940005.1 | mRNA | upstream | 146717 | 6470473 ~ 6508695 (-) | False | LOC110487211 |
| XM_036940006.1 | mRNA | upstream | 146717 | 6470473 ~ 6508695 (-) | False | LOC110487211 |
| XM_036940007.1 | mRNA | upstream | 146717 | 6470473 ~ 6508695 (-) | False | LOC110487211 |
| TU1299538 | other | downstream | 230011 | 6092359 ~ 6093516 (-) | True | G1139916 |
| TU1299433 | other | downstream | 274587 | 6044857 ~ 6048940 (-) | False | LOC110512654 |
| TU1299312 | other | downstream | 651280 | 5671460 ~ 5672247 (-) | True | LOC118938515 |
| TU1297654 | other | downstream | 1066004 | 5201055 ~ 5257523 (-) | True | G1138553 |
| TU1299683 | other | upstream | 282563 | 6606319 ~ 6616996 (-) | False | LOC110485426 |
| TU1299693 | other | upstream | 300396 | 6624152 ~ 6628820 (-) | False | LOC110485426 |
| TU1299690 | other | upstream | 305245 | 6629001 ~ 6649127 (-) | True | LOC110485426 |
| TU1299773 | other | upstream | 374626 | 6698382 ~ 6708978 (-) | False | LOC118938170 |
| TU1299636 | other | upstream | 455492 | 6779248 ~ 6782137 (-) | True | LOC110510388 |
