Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00042662 |
| length | 958 |
| lncRNA type | retained_intron |
| GC content | 0.50 |
| exon number | 5 |
| gene id | XLOC_021457 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007134.7 |
| NCBI id | CM002907.2 |
| chromosome length | 46223584 |
| location | 6077503 ~ 6126003 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | description |
|---|---|
| ZDB-GENE-040426-1531 | Is expressed in hypaxial myotome region; musculature system; myotome; pectoral fin; and somite. Orthologous to several human genes including MYBPH (myosin binding protein H). |
| ensembl_id | ENSDART00000147807 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00042657 | lncRNA | upstream | 155159 | 5906165 ~ 5922464 (+) | True | XLOC_021455 |
| TCONS_00042656 | lncRNA | upstream | 169644 | 5871506 ~ 5907979 (+) | False | XLOC_021455 |
| TCONS_00042652 | lncRNA | upstream | 453954 | 5595941 ~ 5623669 (+) | True | XLOC_021452 |
| TCONS_00042651 | lncRNA | upstream | 453980 | 5595648 ~ 5623643 (+) | False | XLOC_021452 |
| TCONS_00044775 | lncRNA | upstream | 588280 | 5471000 ~ 5489343 (+) | False | XLOC_021449 |
| TCONS_00044776 | lncRNA | downstream | 231863 | 6328346 ~ 6341688 (+) | True | XLOC_021460 |
| TCONS_00042671 | lncRNA | downstream | 538602 | 6635085 ~ 6661864 (+) | False | XLOC_021463 |
| TCONS_00042670 | lncRNA | downstream | 538689 | 6635172 ~ 6652147 (+) | True | XLOC_021463 |
| TCONS_00044777 | lncRNA | downstream | 755448 | 6851931 ~ 6865956 (+) | True | XLOC_021467 |
| TCONS_00044656 | lncRNA | downstream | 1108056 | 7204539 ~ 7206195 (+) | False | XLOC_021469 |
| TCONS_00042659 | mRNA | upstream | 10587 | 5977965 ~ 6067036 (+) | False | XLOC_021456 |
| TCONS_00042658 | mRNA | upstream | 10587 | 5977965 ~ 6067036 (+) | True | XLOC_021456 |
| TCONS_00042654 | mRNA | upstream | 334479 | 5736226 ~ 5743144 (+) | False | XLOC_021454 |
| TCONS_00042655 | mRNA | upstream | 334481 | 5736240 ~ 5743142 (+) | True | XLOC_021454 |
| TCONS_00042653 | mRNA | upstream | 437948 | 5631381 ~ 5639675 (+) | True | XLOC_021453 |
| TCONS_00042663 | mRNA | downstream | 45058 | 6141541 ~ 6156179 (+) | True | XLOC_021458 |
| TCONS_00042664 | mRNA | downstream | 136412 | 6232895 ~ 6313808 (+) | False | XLOC_021459 |
| TCONS_00042665 | mRNA | downstream | 176155 | 6272638 ~ 6313351 (+) | False | XLOC_021459 |
| TCONS_00042667 | mRNA | downstream | 447970 | 6544453 ~ 6574123 (+) | True | XLOC_021461 |
| TCONS_00042668 | mRNA | downstream | 489984 | 6586467 ~ 6632106 (+) | False | XLOC_021462 |
| TCONS_00042596 | other | upstream | 2342614 | 3721041 ~ 3735009 (+) | False | XLOC_021425 |
| TCONS_00042520 | other | upstream | 5635271 | 442237 ~ 442352 (+) | True | XLOC_021384 |
| TCONS_00042519 | other | upstream | 5664964 | 412542 ~ 412659 (+) | True | XLOC_021383 |
| TCONS_00042509 | other | upstream | 5764304 | 309063 ~ 313319 (+) | False | XLOC_021378 |
| TCONS_00042508 | other | upstream | 5828523 | 240604 ~ 249100 (+) | True | XLOC_021377 |
| TCONS_00042666 | other | downstream | 180692 | 6277175 ~ 6304274 (+) | True | XLOC_021459 |
| TCONS_00042675 | other | downstream | 729205 | 6825688 ~ 6825802 (+) | True | XLOC_021466 |
| TCONS_00042706 | other | downstream | 3211091 | 9307574 ~ 9308561 (+) | True | XLOC_021488 |
| TCONS_00042716 | other | downstream | 3521730 | 9618213 ~ 9618335 (+) | True | XLOC_021493 |
| TCONS_00042717 | other | downstream | 3630927 | 9727410 ~ 9727432 (+) | True | XLOC_021494 |
