Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1329381 |
| length | 297 |
| lncRNA type | inter_gene |
| GC content | 0.56 |
| exon number | 1 |
| gene id | G1165740 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 32542043 ~ 32542339 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1329094 | lncRNA | upstream | 33907 | 32506892 ~ 32508136 (+) | True | G1165475 |
| TU1329008 | lncRNA | upstream | 251131 | 32290341 ~ 32290912 (+) | True | LOC110486139 |
| TU1329035 | lncRNA | upstream | 278184 | 32263263 ~ 32263859 (+) | True | G1165418 |
| TU1329028 | lncRNA | upstream | 290523 | 32251306 ~ 32251520 (+) | True | G1165411 |
| TU1328965 | lncRNA | upstream | 305193 | 32185478 ~ 32236850 (+) | True | G1165356 |
| TU1329398 | lncRNA | downstream | 7758 | 32550097 ~ 32550457 (+) | True | G1165755 |
| TU1329413 | lncRNA | downstream | 32512 | 32574851 ~ 32590340 (+) | True | G1165768 |
| TU1329464 | lncRNA | downstream | 115273 | 32657612 ~ 32672802 (+) | True | G1165814 |
| TU1329467 | lncRNA | downstream | 123325 | 32665664 ~ 32674186 (+) | True | G1165817 |
| TU1329493 | lncRNA | downstream | 170902 | 32713241 ~ 32713805 (+) | True | G1165840 |
| NM_001124690.2 | mRNA | upstream | 13192 | 32525237 ~ 32528851 (+) | True | gh2 |
| NM_001124732.1 | mRNA | upstream | 36118 | 32462211 ~ 32505925 (+) | True | LOC100136790 |
| XR_005035777.1 | mRNA | upstream | 59452 | 32482538 ~ 32482591 (+) | True | LOC118938569 |
| XM_036940774.1 | mRNA | upstream | 171395 | 32290346 ~ 32370648 (+) | False | LOC110486139 |
| LOC110487530 | mRNA | downstream | 9908 | 32552247 ~ 32566783 (+) | True | LOC110487530 |
| XM_021556157.2 | mRNA | downstream | 172598 | 32714937 ~ 32722676 (+) | False | ifn2 |
| NM_001160505.1 | mRNA | downstream | 173100 | 32715439 ~ 32722675 (+) | False | ifn2 |
| XM_036939702.1 | mRNA | downstream | 173132 | 32715471 ~ 32722676 (+) | False | ifn2 |
| LOC118938068 | mRNA | downstream | 277707 | 32820046 ~ 32824535 (+) | True | LOC118938068 |
| TU1328699 | other | upstream | 431310 | 32001751 ~ 32110733 (+) | False | LOC110486134 |
| TU1327390 | other | upstream | 1422366 | 31114311 ~ 31119677 (+) | True | LOC110486104 |
| TU1326020 | other | upstream | 2710747 | 29830754 ~ 29831296 (+) | True | G1162753 |
| TU1325585 | other | upstream | 3047141 | 29494362 ~ 29494902 (+) | True | G1162364 |
| TU1325047 | other | upstream | 3171096 | 29364052 ~ 29370947 (+) | True | si:ch211-126j24.1 |
| TU1329495 | other | downstream | 172917 | 32715256 ~ 32722462 (+) | True | ifn2 |
| TU1329888 | other | downstream | 686774 | 33229113 ~ 33230483 (+) | True | LOC110486146 |
| TU1330025 | other | downstream | 697614 | 33239953 ~ 33249208 (+) | False | G1166318 |
| TU1330567 | other | downstream | 1248301 | 33790640 ~ 33803665 (+) | True | G1166779 |
| TU1331612 | other | downstream | 2138849 | 34681188 ~ 34687650 (+) | True | LOC110486188 |
