Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1329557 |
| length | 341 |
| lncRNA type | inter_gene |
| GC content | 0.37 |
| exon number | 1 |
| gene id | G1165893 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 32803893 ~ 32804233 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1329549 | lncRNA | upstream | 15703 | 32787984 ~ 32788190 (+) | True | G1165885 |
| TU1329493 | lncRNA | upstream | 90088 | 32713241 ~ 32713805 (+) | True | G1165840 |
| TU1329467 | lncRNA | upstream | 129707 | 32665664 ~ 32674186 (+) | True | G1165817 |
| TU1329464 | lncRNA | upstream | 131091 | 32657612 ~ 32672802 (+) | True | G1165814 |
| TU1329413 | lncRNA | upstream | 213553 | 32574851 ~ 32590340 (+) | True | G1165768 |
| TU1329563 | lncRNA | downstream | 10385 | 32814618 ~ 32814867 (+) | True | G1165899 |
| TU1329566 | lncRNA | downstream | 14762 | 32818995 ~ 32819202 (+) | True | G1165902 |
| TU1329525 | lncRNA | downstream | 35920 | 32840153 ~ 32843099 (+) | True | LOC110486141 |
| TU1329577 | lncRNA | downstream | 49024 | 32853257 ~ 32853636 (+) | True | G1165913 |
| TU1329578 | lncRNA | downstream | 49690 | 32853923 ~ 32858140 (+) | True | G1165914 |
| XM_021556157.2 | mRNA | upstream | 81217 | 32714937 ~ 32722676 (+) | False | ifn2 |
| XM_036939702.1 | mRNA | upstream | 81217 | 32715471 ~ 32722676 (+) | False | ifn2 |
| NM_001160505.1 | mRNA | upstream | 81218 | 32715439 ~ 32722675 (+) | False | ifn2 |
| LOC110487530 | mRNA | upstream | 237110 | 32552247 ~ 32566783 (+) | True | LOC110487530 |
| NM_001124690.2 | mRNA | upstream | 275042 | 32525237 ~ 32528851 (+) | True | gh2 |
| LOC118938068 | mRNA | downstream | 15813 | 32820046 ~ 32824535 (+) | True | LOC118938068 |
| LOC110485150 | mRNA | downstream | 20989 | 32825222 ~ 32826023 (+) | True | LOC110485150 |
| XM_021557519.2 | mRNA | downstream | 22259 | 32826492 ~ 32843099 (+) | False | LOC110486141 |
| XM_021557520.2 | mRNA | downstream | 22259 | 32826492 ~ 32843099 (+) | False | LOC110486141 |
| XM_021557521.2 | mRNA | downstream | 22259 | 32826492 ~ 32843099 (+) | False | LOC110486141 |
| TU1329495 | other | upstream | 81431 | 32715256 ~ 32722462 (+) | True | ifn2 |
| TU1328699 | other | upstream | 693160 | 32001751 ~ 32110733 (+) | False | LOC110486134 |
| TU1327390 | other | upstream | 1684216 | 31114311 ~ 31119677 (+) | True | LOC110486104 |
| TU1326020 | other | upstream | 2972597 | 29830754 ~ 29831296 (+) | True | G1162753 |
| TU1325585 | other | upstream | 3308991 | 29494362 ~ 29494902 (+) | True | G1162364 |
| TU1329888 | other | downstream | 424880 | 33229113 ~ 33230483 (+) | True | LOC110486146 |
| TU1330025 | other | downstream | 435720 | 33239953 ~ 33249208 (+) | False | G1166318 |
| TU1330567 | other | downstream | 986407 | 33790640 ~ 33803665 (+) | True | G1166779 |
| TU1331612 | other | downstream | 1876955 | 34681188 ~ 34687650 (+) | True | LOC110486188 |
| TU1333280 | other | downstream | 3185623 | 35989856 ~ 35992600 (+) | True | G1169121 |
