Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1336971 |
| length | 645 |
| lncRNA type | inter_gene |
| GC content | 0.45 |
| exon number | 1 |
| gene id | G1172361 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 38818001 ~ 38818645 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1336829 | lncRNA | downstream | 7240 | 38810379 ~ 38810761 (-) | True | G1172240 |
| TU1336819 | lncRNA | downstream | 20455 | 38797318 ~ 38797546 (-) | True | G1172230 |
| TU1336761 | lncRNA | downstream | 88644 | 38729015 ~ 38729357 (-) | True | G1172177 |
| TU1336642 | lncRNA | downstream | 126997 | 38664357 ~ 38691004 (-) | True | G1172062 |
| TU1336624 | lncRNA | downstream | 189584 | 38627663 ~ 38628417 (-) | True | G1172045 |
| TU1336983 | lncRNA | upstream | 17190 | 38835835 ~ 38836146 (-) | True | G1172372 |
| TU1337046 | lncRNA | upstream | 165759 | 38984404 ~ 38990726 (-) | False | G1172431 |
| TU1337045 | lncRNA | upstream | 170467 | 38989112 ~ 38990726 (-) | True | G1172431 |
| TU1337109 | lncRNA | upstream | 189742 | 39008387 ~ 39008764 (-) | True | G1172485 |
| TU1337182 | lncRNA | upstream | 243559 | 39062204 ~ 39062470 (-) | True | G1172557 |
| XM_021557782.2 | mRNA | downstream | 10443 | 38712701 ~ 38807558 (-) | True | LOC110486300 |
| LOC110486299 | mRNA | downstream | 238693 | 38577130 ~ 38579308 (-) | True | LOC110486299 |
| XM_021557780.2 | mRNA | downstream | 266195 | 38497751 ~ 38551806 (-) | True | LOC110486297 |
| XM_021557779.2 | mRNA | downstream | 266198 | 38490118 ~ 38551803 (-) | False | LOC110486297 |
| LOC110486295 | mRNA | downstream | 397740 | 38411240 ~ 38420261 (-) | True | LOC110486295 |
| XM_021557789.2 | mRNA | upstream | 96482 | 38915127 ~ 38919761 (-) | False | LOC110486304 |
| XM_021557790.2 | mRNA | upstream | 96482 | 38915127 ~ 38928959 (-) | True | LOC110486304 |
| XM_021557797.2 | mRNA | upstream | 246519 | 39065164 ~ 39071223 (-) | False | LOC110486307 |
| XM_036941019.1 | mRNA | upstream | 318275 | 39136920 ~ 39165268 (-) | False | LOC110486310 |
| XM_036941020.1 | mRNA | upstream | 318275 | 39136920 ~ 39165268 (-) | False | LOC110486310 |
| TU1335834 | other | downstream | 1619361 | 37198228 ~ 37198640 (-) | True | G1171337 |
| TU1335637 | other | downstream | 1933661 | 36884018 ~ 36884340 (-) | True | G1171149 |
| TU1335481 | other | downstream | 1989576 | 36819594 ~ 36828425 (-) | False | G1171057 |
| TU1337466 | other | upstream | 362129 | 39180774 ~ 39181194 (-) | False | LOC110486310 |
| TU1337500 | other | upstream | 429507 | 39248152 ~ 39250093 (-) | False | LOC110486313 |
| TU1337501 | other | upstream | 429507 | 39248152 ~ 39250310 (-) | False | LOC110486313 |
| TU1337502 | other | upstream | 429507 | 39248152 ~ 39250310 (-) | True | LOC110486313 |
| TU1337573 | other | upstream | 509571 | 39328216 ~ 39331239 (-) | True | LOC110486318 |
