Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1336983 |
| length | 312 |
| lncRNA type | inter_gene |
| GC content | 0.48 |
| exon number | 1 |
| gene id | G1172372 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 38835835 ~ 38836146 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1336971 | lncRNA | downstream | 17190 | 38818001 ~ 38818645 (-) | True | G1172361 |
| TU1336829 | lncRNA | downstream | 25074 | 38810379 ~ 38810761 (-) | True | G1172240 |
| TU1336819 | lncRNA | downstream | 38289 | 38797318 ~ 38797546 (-) | True | G1172230 |
| TU1336761 | lncRNA | downstream | 106478 | 38729015 ~ 38729357 (-) | True | G1172177 |
| TU1336642 | lncRNA | downstream | 144831 | 38664357 ~ 38691004 (-) | True | G1172062 |
| TU1337046 | lncRNA | upstream | 148258 | 38984404 ~ 38990726 (-) | False | G1172431 |
| TU1337045 | lncRNA | upstream | 152966 | 38989112 ~ 38990726 (-) | True | G1172431 |
| TU1337109 | lncRNA | upstream | 172241 | 39008387 ~ 39008764 (-) | True | G1172485 |
| TU1337182 | lncRNA | upstream | 226058 | 39062204 ~ 39062470 (-) | True | G1172557 |
| TU1337185 | lncRNA | upstream | 229831 | 39065977 ~ 39066239 (-) | True | LOC110486307 |
| XM_021557782.2 | mRNA | downstream | 28277 | 38712701 ~ 38807558 (-) | True | LOC110486300 |
| LOC110486299 | mRNA | downstream | 256527 | 38577130 ~ 38579308 (-) | True | LOC110486299 |
| XM_021557780.2 | mRNA | downstream | 284029 | 38497751 ~ 38551806 (-) | True | LOC110486297 |
| XM_021557779.2 | mRNA | downstream | 284032 | 38490118 ~ 38551803 (-) | False | LOC110486297 |
| LOC110486295 | mRNA | downstream | 415574 | 38411240 ~ 38420261 (-) | True | LOC110486295 |
| XM_021557789.2 | mRNA | upstream | 78981 | 38915127 ~ 38919761 (-) | False | LOC110486304 |
| XM_021557790.2 | mRNA | upstream | 78981 | 38915127 ~ 38928959 (-) | True | LOC110486304 |
| XM_021557797.2 | mRNA | upstream | 229018 | 39065164 ~ 39071223 (-) | False | LOC110486307 |
| XM_036941019.1 | mRNA | upstream | 300774 | 39136920 ~ 39165268 (-) | False | LOC110486310 |
| XM_036941020.1 | mRNA | upstream | 300774 | 39136920 ~ 39165268 (-) | False | LOC110486310 |
| TU1335834 | other | downstream | 1637195 | 37198228 ~ 37198640 (-) | True | G1171337 |
| TU1335637 | other | downstream | 1951495 | 36884018 ~ 36884340 (-) | True | G1171149 |
| TU1335481 | other | downstream | 2007410 | 36819594 ~ 36828425 (-) | False | G1171057 |
| TU1337466 | other | upstream | 344628 | 39180774 ~ 39181194 (-) | False | LOC110486310 |
| TU1337500 | other | upstream | 412006 | 39248152 ~ 39250093 (-) | False | LOC110486313 |
| TU1337501 | other | upstream | 412006 | 39248152 ~ 39250310 (-) | False | LOC110486313 |
| TU1337502 | other | upstream | 412006 | 39248152 ~ 39250310 (-) | True | LOC110486313 |
| TU1337573 | other | upstream | 492070 | 39328216 ~ 39331239 (-) | True | LOC110486318 |
