Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1337629 |
| length | 339 |
| lncRNA type | inter_gene |
| GC content | 0.40 |
| exon number | 1 |
| gene id | G1172934 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 39385955 ~ 39386293 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1337618 | lncRNA | downstream | 10585 | 39374144 ~ 39375370 (-) | True | G1172924 |
| TU1337606 | lncRNA | downstream | 15303 | 39370387 ~ 39370652 (-) | True | G1172913 |
| TU1337603 | lncRNA | downstream | 16476 | 39369258 ~ 39369479 (-) | True | G1172910 |
| TU1337598 | lncRNA | downstream | 19869 | 39365862 ~ 39366086 (-) | True | G1172905 |
| TU1337507 | lncRNA | downstream | 106091 | 39278521 ~ 39279864 (-) | True | G1172823 |
| TU1338053 | lncRNA | upstream | 89548 | 39475841 ~ 39476080 (-) | True | G1173333 |
| TU1338235 | lncRNA | upstream | 312310 | 39698603 ~ 39698845 (-) | True | G1173485 |
| TU1338245 | lncRNA | upstream | 321746 | 39708039 ~ 39708246 (-) | True | G1173495 |
| TU1338255 | lncRNA | upstream | 334845 | 39721138 ~ 39721415 (-) | True | G1173505 |
| TU1338189 | lncRNA | upstream | 353142 | 39739435 ~ 39742987 (-) | True | LOC110486323 |
| XM_036941031.1 | mRNA | downstream | 53989 | 39328367 ~ 39331966 (-) | False | LOC110486318 |
| XM_021557824.2 | mRNA | downstream | 54093 | 39328367 ~ 39331862 (-) | False | LOC110486318 |
| XM_021556143.2 | mRNA | downstream | 63517 | 39315322 ~ 39322438 (-) | False | LOC118936372 |
| XM_021557832.2 | mRNA | upstream | 140480 | 39526773 ~ 39615110 (-) | True | LOC110486320 |
| XM_021557834.2 | mRNA | upstream | 353129 | 39739422 ~ 39760173 (-) | False | LOC110486323 |
| XM_021557846.2 | mRNA | upstream | 697376 | 40083669 ~ 40096703 (-) | False | LOC110486334 |
| XM_021557847.2 | mRNA | upstream | 697376 | 40083669 ~ 40096704 (-) | True | LOC110486334 |
| XM_021557854.2 | mRNA | upstream | 710676 | 40096969 ~ 40099584 (-) | True | igfals |
| TU1337573 | other | downstream | 54716 | 39328216 ~ 39331239 (-) | True | LOC110486318 |
| TU1337501 | other | downstream | 135645 | 39248152 ~ 39250310 (-) | False | LOC110486313 |
| TU1337502 | other | downstream | 135645 | 39248152 ~ 39250310 (-) | True | LOC110486313 |
| TU1337500 | other | downstream | 135862 | 39248152 ~ 39250093 (-) | False | LOC110486313 |
| TU1337466 | other | downstream | 204761 | 39180774 ~ 39181194 (-) | False | LOC110486310 |
| TU1338408 | other | upstream | 537629 | 39923922 ~ 39924959 (-) | True | G1173645 |
| TU1339538 | other | upstream | 929825 | 40316118 ~ 40316859 (-) | True | G1174658 |
| TU1339628 | other | upstream | 1070602 | 40456895 ~ 40457681 (-) | True | G1174741 |
| TU1339785 | other | upstream | 1447610 | 40833903 ~ 40834636 (-) | True | LOC110486364 |
| TU1340027 | other | upstream | 1898489 | 41284782 ~ 41289789 (-) | False | col5a3a |
