Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1338408 |
| length | 1038 |
| RNA type | TUCP |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G1173645 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 39923922 ~ 39924959 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1338379 | lncRNA | downstream | 3610 | 39920103 ~ 39920312 (-) | True | G1173617 |
| TU1338364 | lncRNA | downstream | 22171 | 39901545 ~ 39901751 (-) | True | G1173602 |
| TU1338324 | lncRNA | downstream | 75043 | 39848412 ~ 39848879 (-) | True | G1173567 |
| TU1338316 | lncRNA | downstream | 80383 | 39840946 ~ 39843539 (-) | True | G1173559 |
| TU1338315 | lncRNA | downstream | 80503 | 39840946 ~ 39843419 (-) | False | G1173559 |
| TU1338411 | lncRNA | upstream | 5342 | 39930301 ~ 39930560 (-) | True | G1173648 |
| TU1338438 | lncRNA | upstream | 42934 | 39967893 ~ 39968218 (-) | True | G1173675 |
| TU1338444 | lncRNA | upstream | 45558 | 39970517 ~ 39970770 (-) | True | G1173681 |
| TU1338466 | lncRNA | upstream | 55052 | 39980011 ~ 39980855 (-) | True | G1173697 |
| TU1339339 | lncRNA | upstream | 120035 | 40044994 ~ 40047189 (-) | True | G1174463 |
| XM_021557834.2 | mRNA | downstream | 163749 | 39739422 ~ 39760173 (-) | False | LOC110486323 |
| XM_021557832.2 | mRNA | downstream | 308812 | 39526773 ~ 39615110 (-) | True | LOC110486320 |
| XM_036941031.1 | mRNA | downstream | 591956 | 39328367 ~ 39331966 (-) | False | LOC110486318 |
| XM_021557824.2 | mRNA | downstream | 592060 | 39328367 ~ 39331862 (-) | False | LOC110486318 |
| XM_021556143.2 | mRNA | downstream | 601484 | 39315322 ~ 39322438 (-) | False | LOC118936372 |
| XM_021557846.2 | mRNA | upstream | 158710 | 40083669 ~ 40096703 (-) | False | LOC110486334 |
| XM_021557847.2 | mRNA | upstream | 158710 | 40083669 ~ 40096704 (-) | True | LOC110486334 |
| XM_021557854.2 | mRNA | upstream | 172010 | 40096969 ~ 40099584 (-) | True | igfals |
| XM_021557855.2 | mRNA | upstream | 263027 | 40187986 ~ 40216345 (-) | True | shisa9b |
| XM_021557859.2 | mRNA | upstream | 423828 | 40348787 ~ 40351938 (-) | False | LOC110486342 |
| TU1337573 | other | downstream | 592683 | 39328216 ~ 39331239 (-) | True | LOC110486318 |
| TU1337501 | other | downstream | 673612 | 39248152 ~ 39250310 (-) | False | LOC110486313 |
| TU1337502 | other | downstream | 673612 | 39248152 ~ 39250310 (-) | True | LOC110486313 |
| TU1337500 | other | downstream | 673829 | 39248152 ~ 39250093 (-) | False | LOC110486313 |
| TU1337466 | other | downstream | 742728 | 39180774 ~ 39181194 (-) | False | LOC110486310 |
| TU1339538 | other | upstream | 391159 | 40316118 ~ 40316859 (-) | True | G1174658 |
| TU1339628 | other | upstream | 531936 | 40456895 ~ 40457681 (-) | True | G1174741 |
| TU1339785 | other | upstream | 908944 | 40833903 ~ 40834636 (-) | True | LOC110486364 |
| TU1340027 | other | upstream | 1359823 | 41284782 ~ 41289789 (-) | False | col5a3a |
| TU1340025 | other | upstream | 1365390 | 41290349 ~ 41291794 (-) | True | col5a3a |
