Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1339353 |
| length | 256 |
| lncRNA type | inter_gene |
| GC content | 0.49 |
| exon number | 2 |
| gene id | G1174477 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 40053154 ~ 40053661 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1339338 | lncRNA | downstream | 2405 | 40049018 ~ 40050749 (-) | True | G1174462 |
| TU1339339 | lncRNA | downstream | 5965 | 40044994 ~ 40047189 (-) | True | G1174463 |
| TU1338466 | lncRNA | downstream | 72299 | 39980011 ~ 39980855 (-) | True | G1173697 |
| TU1338444 | lncRNA | downstream | 82384 | 39970517 ~ 39970770 (-) | True | G1173681 |
| TU1338438 | lncRNA | downstream | 84936 | 39967893 ~ 39968218 (-) | True | G1173675 |
| TU1339354 | lncRNA | upstream | 445 | 40054106 ~ 40054431 (-) | True | G1174478 |
| TU1339360 | lncRNA | upstream | 9179 | 40062840 ~ 40063209 (-) | True | G1174484 |
| TU1339505 | lncRNA | upstream | 214458 | 40268119 ~ 40268449 (-) | True | G1174626 |
| TU1339507 | lncRNA | upstream | 215460 | 40269121 ~ 40269322 (-) | True | G1174628 |
| TU1339512 | lncRNA | upstream | 226119 | 40279780 ~ 40280137 (-) | True | G1174633 |
| XM_021557834.2 | mRNA | downstream | 292981 | 39739422 ~ 39760173 (-) | False | LOC110486323 |
| XM_021557832.2 | mRNA | downstream | 438044 | 39526773 ~ 39615110 (-) | True | LOC110486320 |
| XM_036941031.1 | mRNA | downstream | 721188 | 39328367 ~ 39331966 (-) | False | LOC110486318 |
| XM_021557824.2 | mRNA | downstream | 721292 | 39328367 ~ 39331862 (-) | False | LOC110486318 |
| XM_036941030.1 | mRNA | downstream | 730716 | 39315322 ~ 39322438 (-) | True | LOC118936372 |
| XM_021557846.2 | mRNA | upstream | 30008 | 40083669 ~ 40096703 (-) | False | LOC110486334 |
| XM_021557847.2 | mRNA | upstream | 30008 | 40083669 ~ 40096704 (-) | True | LOC110486334 |
| XM_021557854.2 | mRNA | upstream | 43308 | 40096969 ~ 40099584 (-) | True | igfals |
| XM_021557855.2 | mRNA | upstream | 134325 | 40187986 ~ 40216345 (-) | True | shisa9b |
| XM_021557859.2 | mRNA | upstream | 295126 | 40348787 ~ 40351938 (-) | False | LOC110486342 |
| TU1338408 | other | downstream | 128195 | 39923922 ~ 39924959 (-) | True | G1173645 |
| TU1337573 | other | downstream | 721915 | 39328216 ~ 39331239 (-) | True | LOC110486318 |
| TU1337501 | other | downstream | 802844 | 39248152 ~ 39250310 (-) | False | LOC110486313 |
| TU1337502 | other | downstream | 802844 | 39248152 ~ 39250310 (-) | True | LOC110486313 |
| TU1337500 | other | downstream | 803061 | 39248152 ~ 39250093 (-) | False | LOC110486313 |
| TU1339538 | other | upstream | 262457 | 40316118 ~ 40316859 (-) | True | G1174658 |
| TU1339628 | other | upstream | 403234 | 40456895 ~ 40457681 (-) | True | G1174741 |
| TU1339785 | other | upstream | 780242 | 40833903 ~ 40834636 (-) | True | LOC110486364 |
| TU1340027 | other | upstream | 1231121 | 41284782 ~ 41289789 (-) | False | col5a3a |
| TU1340025 | other | upstream | 1236688 | 41290349 ~ 41291794 (-) | True | col5a3a |
