Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1339512 |
| length | 358 |
| lncRNA type | inter_gene |
| GC content | 0.47 |
| exon number | 1 |
| gene id | G1174633 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 40279780 ~ 40280137 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1339507 | lncRNA | downstream | 10458 | 40269121 ~ 40269322 (-) | True | G1174628 |
| TU1339505 | lncRNA | downstream | 11331 | 40268119 ~ 40268449 (-) | True | G1174626 |
| TU1339360 | lncRNA | downstream | 216571 | 40062840 ~ 40063209 (-) | True | G1174484 |
| TU1339354 | lncRNA | downstream | 225349 | 40054106 ~ 40054431 (-) | True | G1174478 |
| TU1339353 | lncRNA | downstream | 226119 | 40053154 ~ 40053661 (-) | True | G1174477 |
| TU1339528 | lncRNA | upstream | 21627 | 40301764 ~ 40301985 (-) | True | G1174648 |
| TU1339530 | lncRNA | upstream | 22763 | 40302900 ~ 40303103 (-) | True | G1174650 |
| TU1339541 | lncRNA | upstream | 39788 | 40319925 ~ 40320135 (-) | True | G1174661 |
| TU1339542 | lncRNA | upstream | 40069 | 40320206 ~ 40320409 (-) | True | G1174662 |
| TU1339544 | lncRNA | upstream | 41413 | 40321550 ~ 40321760 (-) | True | G1174664 |
| XM_021557855.2 | mRNA | downstream | 63435 | 40187986 ~ 40216345 (-) | True | shisa9b |
| XM_021557854.2 | mRNA | downstream | 180196 | 40096969 ~ 40099584 (-) | True | igfals |
| XM_021557847.2 | mRNA | downstream | 183076 | 40083669 ~ 40096704 (-) | True | LOC110486334 |
| XM_021557846.2 | mRNA | downstream | 183077 | 40083669 ~ 40096703 (-) | False | LOC110486334 |
| XM_021557834.2 | mRNA | downstream | 519607 | 39739422 ~ 39760173 (-) | False | LOC110486323 |
| XM_021557859.2 | mRNA | upstream | 68650 | 40348787 ~ 40351938 (-) | False | LOC110486342 |
| XM_036941052.1 | mRNA | upstream | 68650 | 40348787 ~ 40351938 (-) | False | LOC110486342 |
| XM_021557858.2 | mRNA | upstream | 68650 | 40348787 ~ 40351985 (-) | True | LOC110486342 |
| XR_005035538.1 | mRNA | upstream | 71956 | 40352093 ~ 40354248 (-) | False | snrnp25 |
| XM_021557863.2 | mRNA | upstream | 71956 | 40352093 ~ 40354269 (-) | False | snrnp25 |
| TU1338408 | other | downstream | 354821 | 39923922 ~ 39924959 (-) | True | G1173645 |
| TU1337573 | other | downstream | 948541 | 39328216 ~ 39331239 (-) | True | LOC110486318 |
| TU1337501 | other | downstream | 1029470 | 39248152 ~ 39250310 (-) | False | LOC110486313 |
| TU1337502 | other | downstream | 1029470 | 39248152 ~ 39250310 (-) | True | LOC110486313 |
| TU1337500 | other | downstream | 1029687 | 39248152 ~ 39250093 (-) | False | LOC110486313 |
| TU1339538 | other | upstream | 35981 | 40316118 ~ 40316859 (-) | True | G1174658 |
| TU1339628 | other | upstream | 176758 | 40456895 ~ 40457681 (-) | True | G1174741 |
| TU1339785 | other | upstream | 553766 | 40833903 ~ 40834636 (-) | True | LOC110486364 |
| TU1340027 | other | upstream | 1004645 | 41284782 ~ 41289789 (-) | False | col5a3a |
| TU1340025 | other | upstream | 1010212 | 41290349 ~ 41291794 (-) | True | col5a3a |
