Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1338797 |
| length | 592 |
| lncRNA type | antisense_over |
| GC content | 0.48 |
| exon number | 2 |
| gene id | G1173986 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 40576218 ~ 40577203 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| id | description |
|---|
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1338799 | lncRNA | upstream | 4193 | 40569804 ~ 40572025 (+) | True | G1173987 |
| TU1338802 | lncRNA | upstream | 98776 | 40476588 ~ 40477442 (+) | True | G1173990 |
| TU1338763 | lncRNA | upstream | 128903 | 40446307 ~ 40447315 (+) | True | G1173964 |
| TU1338755 | lncRNA | upstream | 143080 | 40432395 ~ 40433138 (+) | True | G1173959 |
| TU1338736 | lncRNA | upstream | 167394 | 40408588 ~ 40408824 (+) | True | G1173940 |
| TU1338862 | lncRNA | downstream | 47422 | 40624361 ~ 40624631 (+) | True | G1174047 |
| TU1338870 | lncRNA | downstream | 60735 | 40637674 ~ 40639607 (+) | True | G1174055 |
| TU1338885 | lncRNA | downstream | 87988 | 40664927 ~ 40665150 (+) | True | G1174069 |
| TU1338886 | lncRNA | downstream | 90236 | 40667175 ~ 40667968 (+) | True | G1174070 |
| TU1338887 | lncRNA | downstream | 91133 | 40668072 ~ 40669829 (+) | True | G1174071 |
| XM_021557877.2 | mRNA | upstream | 2735 | 40572568 ~ 40573483 (+) | True | LOC110486354 |
| XM_021557875.2 | mRNA | upstream | 34481 | 40540811 ~ 40541737 (+) | True | LOC110486353 |
| XM_021557872.2 | mRNA | upstream | 40604 | 40534711 ~ 40535614 (+) | True | LOC110486351 |
| XM_036941058.1 | mRNA | upstream | 68389 | 40506317 ~ 40507829 (+) | True | LOC110486349 |
| NM_001124257.1 | mRNA | upstream | 137361 | 40436236 ~ 40438857 (+) | True | aanat-2 |
| NM_001124550.1 | mRNA | downstream | 1482 | 40578421 ~ 40579519 (+) | True | LOC100136296 |
| XR_005035542.1 | mRNA | downstream | 3752 | 40580691 ~ 40583273 (+) | True | LOC118938288 |
| XR_005035541.1 | mRNA | downstream | 11783 | 40588722 ~ 40592987 (+) | True | LOC118938287 |
| XM_036941061.1 | mRNA | downstream | 33340 | 40610279 ~ 40615060 (+) | True | LOC118936354 |
| XM_036941060.1 | mRNA | downstream | 37358 | 40614297 ~ 40615287 (+) | True | LOC118936300 |
| TU1338645 | other | upstream | 220245 | 40354342 ~ 40355973 (+) | False | polr3k |
| TU1338644 | other | upstream | 220245 | 40354462 ~ 40355973 (+) | True | polr3k |
| TU1338484 | other | upstream | 420039 | 40080474 ~ 40156179 (+) | False | G1173715 |
| TU1337692 | other | upstream | 1102439 | 39473458 ~ 39473779 (+) | True | G1172996 |
| TU1336844 | other | upstream | 1698463 | 38876193 ~ 38877755 (+) | True | LOC110486302 |
| TU1339054 | other | downstream | 328592 | 40905531 ~ 40906473 (+) | True | G1174211 |
| TU1339102 | other | downstream | 424944 | 41001883 ~ 41003024 (+) | True | G1174245 |
| TU1339025 | other | downstream | 478513 | 41055452 ~ 41058201 (+) | False | LOC110486375 |
| TU1339027 | other | downstream | 480681 | 41057620 ~ 41059937 (+) | False | LOC110486375 |
| TU1340105 | other | downstream | 962552 | 41539491 ~ 41540680 (+) | True | G1175164 |
