Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1339890 |
| length | 205 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G1174973 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 40969495 ~ 40969699 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1339847 | lncRNA | downstream | 51349 | 40917879 ~ 40918146 (-) | True | G1174933 |
| TU1339832 | lncRNA | downstream | 72622 | 40896661 ~ 40896873 (-) | True | G1174918 |
| TU1339825 | lncRNA | downstream | 109809 | 40858912 ~ 40859686 (-) | True | LOC110486365 |
| TU1339743 | lncRNA | downstream | 220790 | 40744625 ~ 40748705 (-) | True | G1174844 |
| TU1339742 | lncRNA | downstream | 221781 | 40744625 ~ 40747714 (-) | False | G1174844 |
| TU1339891 | lncRNA | upstream | 732 | 40970431 ~ 40970768 (-) | True | G1174974 |
| TU1339892 | lncRNA | upstream | 1290 | 40970989 ~ 40971211 (-) | True | G1174975 |
| TU1339901 | lncRNA | upstream | 19180 | 40988879 ~ 40989390 (-) | True | G1174984 |
| TU1339927 | lncRNA | upstream | 88369 | 41058068 ~ 41061452 (-) | False | G1175006 |
| TU1339929 | lncRNA | upstream | 88369 | 41058068 ~ 41059935 (-) | False | G1175006 |
| XM_021557902.2 | mRNA | downstream | 77104 | 40885683 ~ 40892391 (-) | True | LOC110486368 |
| XM_036941090.1 | mRNA | downstream | 85590 | 40872661 ~ 40883905 (-) | True | LOC110486370 |
| XM_021557903.2 | mRNA | downstream | 91546 | 40872661 ~ 40877949 (-) | False | LOC110486370 |
| XM_021557901.2 | mRNA | downstream | 97833 | 40869151 ~ 40871662 (-) | True | LOC110486367 |
| XM_021557900.2 | mRNA | downstream | 100455 | 40863806 ~ 40869040 (-) | True | LOC110486366 |
| XM_021557912.2 | mRNA | upstream | 19888 | 40989587 ~ 40993993 (-) | True | eif3g |
| XM_036941092.1 | mRNA | upstream | 30171 | 40999870 ~ 41001803 (-) | False | p2ry11 |
| XM_036941093.1 | mRNA | upstream | 30171 | 40999870 ~ 41001821 (-) | True | p2ry11 |
| XM_021556239.2 | mRNA | upstream | 32164 | 41001863 ~ 41006451 (-) | True | ppan |
| XM_036941101.1 | mRNA | upstream | 163250 | 41132949 ~ 41196761 (-) | False | LOC110485175 |
| TU1339785 | other | downstream | 134859 | 40833903 ~ 40834636 (-) | True | LOC110486364 |
| TU1339628 | other | downstream | 511814 | 40456895 ~ 40457681 (-) | True | G1174741 |
| TU1339538 | other | downstream | 652636 | 40316118 ~ 40316859 (-) | True | G1174658 |
| TU1338408 | other | downstream | 1044536 | 39923922 ~ 39924959 (-) | True | G1173645 |
| TU1337573 | other | downstream | 1638256 | 39328216 ~ 39331239 (-) | True | LOC110486318 |
| TU1340027 | other | upstream | 315083 | 41284782 ~ 41289789 (-) | False | col5a3a |
| TU1340025 | other | upstream | 320650 | 41290349 ~ 41291794 (-) | True | col5a3a |
| TU1340945 | other | upstream | 1027615 | 41997314 ~ 41997637 (-) | True | G1175904 |
| TU1340947 | other | upstream | 1029653 | 41999352 ~ 42000091 (-) | True | G1175906 |
| TU1341227 | other | upstream | 1358345 | 42328044 ~ 42328572 (-) | True | G1176164 |
