Item | Value |
---|---|
RNA id | TCONS_00042781 |
length | 1826 |
RNA type | mRNA |
GC content | 0.54 |
exon number | 8 |
gene id | XLOC_021540 |
representative | False |
Item | Value |
---|---|
chromosome id | NC_007134.7 |
NCBI id | CM002907.2 |
chromosome length | 46223584 |
location | 14590483 ~ 14731892 (+) |
genome version | GRCz11_2017_zebrafish_Genome |
species | zebrafish (Danio rerio) |
id | name | namespace |
---|---|---|
GO:0006357 | regulation of transcription by RNA polymerase II | biological_process |
GO:0005634 | nucleus | cellular_component |
GO:0046872 | metal ion binding | molecular_function |
GO:0003676 | nucleic acid binding | molecular_function |
GO:0003700 | DNA-binding transcription factor activity | molecular_function |
GO:0000978 | RNA polymerase II cis-regulatory region sequence-specific DNA binding | molecular_function |
id | description |
---|---|
ZDB-GENE-030616-83 | Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human SLC2A4RG (SLC2A4 regulator). |
ensembl_id | ENSDART00000184868 |
RNA id | RNA type | direction | distance | location | representative | gene id |
---|---|---|---|---|---|---|
TCONS_00044797 | lncRNA | upstream | 355476 | 14233725 ~ 14235007 (+) | True | XLOC_021536 |
TCONS_00042774 | lncRNA | upstream | 448248 | 14097508 ~ 14142235 (+) | False | XLOC_021534 |
TCONS_00044796 | lncRNA | upstream | 649205 | 13928339 ~ 13941278 (+) | False | XLOC_021533 |
TCONS_00044795 | lncRNA | upstream | 739991 | 13844754 ~ 13850492 (+) | True | XLOC_021532 |
TCONS_00044794 | lncRNA | upstream | 742779 | 13844557 ~ 13847704 (+) | False | XLOC_021532 |
TCONS_00044660 | lncRNA | downstream | 746703 | 15478184 ~ 15478737 (+) | True | XLOC_021543 |
TCONS_00044661 | lncRNA | downstream | 747264 | 15478745 ~ 15483453 (+) | False | XLOC_021544 |
TCONS_00042787 | lncRNA | downstream | 747600 | 15479081 ~ 15483879 (+) | False | XLOC_021544 |
TCONS_00042788 | lncRNA | downstream | 750459 | 15481940 ~ 15483879 (+) | True | XLOC_021544 |
TCONS_00044662 | lncRNA | downstream | 1018271 | 15749752 ~ 15756516 (+) | True | XLOC_021545 |
TCONS_00042778 | mRNA | upstream | 48893 | 14432323 ~ 14541590 (+) | True | XLOC_021538 |
TCONS_00042777 | mRNA | upstream | 320168 | 14269311 ~ 14270315 (+) | True | XLOC_021537 |
TCONS_00042776 | mRNA | upstream | 359977 | 14217508 ~ 14230506 (+) | True | XLOC_021535 |
TCONS_00042775 | mRNA | upstream | 410176 | 14097508 ~ 14180307 (+) | True | XLOC_021534 |
TCONS_00042773 | mRNA | upstream | 657865 | 13928346 ~ 13932618 (+) | True | XLOC_021533 |
TCONS_00042785 | mRNA | downstream | 40498 | 14771979 ~ 14803801 (+) | True | XLOC_021541 |
TCONS_00042791 | mRNA | downstream | 1699078 | 16430559 ~ 16525698 (+) | False | XLOC_021555 |
TCONS_00042793 | mRNA | downstream | 1738049 | 16469530 ~ 16525698 (+) | True | XLOC_021555 |
TCONS_00042795 | mRNA | downstream | 1889320 | 16620801 ~ 16642181 (+) | False | XLOC_021557 |
TCONS_00042794 | mRNA | downstream | 1889320 | 16620801 ~ 16642181 (+) | False | XLOC_021557 |
TCONS_00042779 | other | upstream | 119912 | 14468003 ~ 14470571 (+) | True | XLOC_021539 |
TCONS_00042770 | other | upstream | 986163 | 13604218 ~ 13604320 (+) | True | XLOC_021527 |
TCONS_00042766 | other | upstream | 1147761 | 13442608 ~ 13442722 (+) | True | XLOC_021525 |
TCONS_00042749 | other | upstream | 2372108 | 12213967 ~ 12218375 (+) | True | XLOC_021513 |
TCONS_00042745 | other | upstream | 2439816 | 12134839 ~ 12150667 (+) | False | XLOC_021511 |
TCONS_00042786 | other | downstream | 621652 | 15353133 ~ 15353249 (+) | True | XLOC_021542 |
TCONS_00042789 | other | downstream | 1018537 | 15750018 ~ 15751546 (+) | True | XLOC_021546 |
TCONS_00042790 | other | downstream | 1625227 | 16356708 ~ 16357229 (+) | True | XLOC_021553 |
TCONS_00042792 | other | downstream | 1713480 | 16444961 ~ 16446040 (+) | True | XLOC_021556 |
TCONS_00042812 | other | downstream | 2127436 | 16858917 ~ 16859033 (+) | True | XLOC_021565 |