Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU1340854 |
| length | 214 |
| lncRNA type | intronic |
| GC content | 0.41 |
| exon number | 1 |
| gene id | G1175815 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_048577.1 |
| NCBI id | CM023231.2 |
| chromosome length | 73332040 |
| location | 41880899 ~ 41881112 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| species | rainbow trout (Oncorhynchus mykiss) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU1340853 | lncRNA | downstream | 198 | 41880488 ~ 41880701 (-) | True | G1175814 |
| TU1340852 | lncRNA | downstream | 471 | 41880197 ~ 41880428 (-) | True | G1175813 |
| TU1340848 | lncRNA | downstream | 5315 | 41875293 ~ 41875584 (-) | True | G1175809 |
| TU1340846 | lncRNA | downstream | 8846 | 41871622 ~ 41872053 (-) | True | G1175807 |
| TU1340596 | lncRNA | downstream | 70397 | 41810143 ~ 41810502 (-) | True | G1175568 |
| TU1340865 | lncRNA | upstream | 17561 | 41898673 ~ 41898902 (-) | True | G1175826 |
| TU1340867 | lncRNA | upstream | 20144 | 41901256 ~ 41901586 (-) | True | G1175828 |
| TU1340871 | lncRNA | upstream | 25083 | 41906195 ~ 41906511 (-) | True | G1175832 |
| TU1340872 | lncRNA | upstream | 25545 | 41906657 ~ 41906887 (-) | True | G1175833 |
| TU1340875 | lncRNA | upstream | 29398 | 41910510 ~ 41910780 (-) | True | G1175836 |
| XM_021559455.2 | mRNA | downstream | 17090 | 41862761 ~ 41863809 (-) | True | LOC110487541 |
| XM_036941126.1 | mRNA | downstream | 23273 | 41778349 ~ 41857626 (-) | False | LOC110486396 |
| XM_036941125.1 | mRNA | downstream | 33240 | 41778349 ~ 41847659 (-) | False | LOC110486396 |
| XM_021557957.2 | mRNA | downstream | 33241 | 41778349 ~ 41847658 (-) | False | LOC110486396 |
| NM_001160565.2 | mRNA | downstream | 147910 | 41730039 ~ 41732989 (-) | True | rl23 |
| XM_021557963.2 | mRNA | upstream | 126534 | 42007646 ~ 42015904 (-) | False | LOC110486400 |
| XM_021557965.2 | mRNA | upstream | 127502 | 42008614 ~ 42015906 (-) | True | LOC110486400 |
| XM_021557985.2 | mRNA | upstream | 329110 | 42210222 ~ 42291977 (-) | False | LOC110486406 |
| XM_021557986.2 | mRNA | upstream | 329110 | 42210222 ~ 42291977 (-) | True | LOC110486406 |
| XR_005035740.1 | mRNA | upstream | 469416 | 42350528 ~ 42357245 (-) | True | LOC118938459 |
| TU1340025 | other | downstream | 589105 | 41290349 ~ 41291794 (-) | True | col5a3a |
| TU1340027 | other | downstream | 591110 | 41284782 ~ 41289789 (-) | False | col5a3a |
| TU1339785 | other | downstream | 1046263 | 40833903 ~ 40834636 (-) | True | LOC110486364 |
| TU1339628 | other | downstream | 1423218 | 40456895 ~ 40457681 (-) | True | G1174741 |
| TU1339538 | other | downstream | 1564040 | 40316118 ~ 40316859 (-) | True | G1174658 |
| TU1340945 | other | upstream | 116202 | 41997314 ~ 41997637 (-) | True | G1175904 |
| TU1340947 | other | upstream | 118240 | 41999352 ~ 42000091 (-) | True | G1175906 |
| TU1341227 | other | upstream | 446932 | 42328044 ~ 42328572 (-) | True | G1176164 |
| TU1341849 | other | upstream | 572047 | 42453159 ~ 42456946 (-) | True | LOC110486413 |
| TU1341929 | other | upstream | 588590 | 42469702 ~ 42471978 (-) | True | LOC110487542 |
